Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nfkb1P25799 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nfkb1P25799 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nfkb1P25799 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nfkb1P25799 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nfkb1P25799 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.88□□□□□ -0.51
Nfkb1P25799 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nfkb1P25799 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nfkb1P25799 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.88□□□□□ -0.51
Nfkb1P25799 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nfkb1P25799 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Nfkb1P25799 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.88□□□□□ -0.51
Nfkb1P25799 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.88□□□□□ -0.51
Nfkb1P25799 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nfkb1P25799 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nfkb1P25799 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nfkb1P25799 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nfkb1P25799 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nfkb1P25799 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nfkb1P25799 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nfkb1P25799 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nfkb1P25799 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nfkb1P25799 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nfkb1P25799 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.87□□□□□ -0.51
Nfkb1P25799 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.87□□□□□ -0.51
Nfkb1P25799 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nfkb1P25799 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nfkb1P25799 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.87□□□□□ -0.51
Nfkb1P25799 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Nfkb1P25799 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nfkb1P25799 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nfkb1P25799 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nfkb1P25799 Gm26013-201ENSMUST00000104404 119 ntBASIC11.87□□□□□ -0.51
Nfkb1P25799 Gm12247-201ENSMUST00000117585 670 ntBASIC11.87□□□□□ -0.51
Nfkb1P25799 Gm11700-201ENSMUST00000119409 403 ntBASIC11.87□□□□□ -0.51
Nfkb1P25799 Gm15782-201ENSMUST00000121073 445 ntBASIC11.87□□□□□ -0.51
Nfkb1P25799 Mir1901-201ENSMUST00000122616 78 ntBASIC11.87□□□□□ -0.51
Nfkb1P25799 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.87□□□□□ -0.51
Nfkb1P25799 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nfkb1P25799 Gm8194-201ENSMUST00000159783 859 ntBASIC11.87□□□□□ -0.51
Nfkb1P25799 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nfkb1P25799 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Nfkb1P25799 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.87□□□□□ -0.51
Nfkb1P25799 Gm7741-201ENSMUST00000181445 989 ntBASIC11.87□□□□□ -0.51
Nfkb1P25799 Gm38210-201ENSMUST00000191944 809 ntBASIC11.87□□□□□ -0.51
Nfkb1P25799 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.87□□□□□ -0.51
Nfkb1P25799 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nfkb1P25799 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.87□□□□□ -0.51
Nfkb1P25799 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.87□□□□□ -0.51
Nfkb1P25799 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Nfkb1P25799 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.87□□□□□ -0.51
Nfkb1P25799 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Nfkb1P25799 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nfkb1P25799 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nfkb1P25799 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Nfkb1P25799 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.87□□□□□ -0.51
Nfkb1P25799 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.87□□□□□ -0.51
Nfkb1P25799 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nfkb1P25799 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nfkb1P25799 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nfkb1P25799 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.87□□□□□ -0.51
Nfkb1P25799 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nfkb1P25799 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nfkb1P25799 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nfkb1P25799 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.87□□□□□ -0.51
Nfkb1P25799 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nfkb1P25799 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Nfkb1P25799 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.86□□□□□ -0.51
Nfkb1P25799 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.86□□□□□ -0.51
Nfkb1P25799 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Nfkb1P25799 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.86□□□□□ -0.51
Nfkb1P25799 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
Nfkb1P25799 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Nfkb1P25799 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Nfkb1P25799 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Gm13937-201ENSMUST00000121000 988 ntBASIC11.86□□□□□ -0.51
Nfkb1P25799 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
Nfkb1P25799 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Gm25072-201ENSMUST00000175233 235 ntBASIC11.86□□□□□ -0.51
Nfkb1P25799 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Gm17825-201ENSMUST00000206836 794 ntBASIC11.86□□□□□ -0.51
Nfkb1P25799 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.86□□□□□ -0.51
Nfkb1P25799 CT009738.1-201ENSMUST00000219031 809 ntBASIC11.86□□□□□ -0.51
Nfkb1P25799 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.86□□□□□ -0.51
Nfkb1P25799 Prrxl1-205ENSMUST00000228878 723 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms