Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.66□□□□□ -0.38
Pde6bP23440 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.66□□□□□ -0.38
Pde6bP23440 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Pde6bP23440 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.66□□□□□ -0.38
Pde6bP23440 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.66□□□□□ -0.38
Pde6bP23440 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Pde6bP23440 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.66□□□□□ -0.38
Pde6bP23440 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.66□□□□□ -0.38
Pde6bP23440 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pde6bP23440 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pde6bP23440 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pde6bP23440 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pde6bP23440 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.65□□□□□ -0.38
Pde6bP23440 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pde6bP23440 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.65□□□□□ -0.38
Pde6bP23440 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.65□□□□□ -0.38
Pde6bP23440 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.65□□□□□ -0.38
Pde6bP23440 Mir1956-201ENSMUST00000157748 65 ntBASIC12.65□□□□□ -0.38
Pde6bP23440 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.65□□□□□ -0.38
Pde6bP23440 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.65□□□□□ -0.38
Pde6bP23440 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.65□□□□□ -0.38
Pde6bP23440 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pde6bP23440 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Pde6bP23440 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 Gm28937-201ENSMUST00000185413 695 ntBASIC12.65□□□□□ -0.38
Pde6bP23440 Gm29400-201ENSMUST00000187208 695 ntBASIC12.65□□□□□ -0.38
Pde6bP23440 Gm28662-201ENSMUST00000188446 695 ntBASIC12.65□□□□□ -0.38
Pde6bP23440 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.65□□□□□ -0.38
Pde6bP23440 Gm28251-201ENSMUST00000188835 695 ntBASIC12.65□□□□□ -0.38
Pde6bP23440 Gm37981-201ENSMUST00000194280 535 ntBASIC12.65□□□□□ -0.38
Pde6bP23440 Gm37318-201ENSMUST00000194325 695 ntBASIC12.65□□□□□ -0.38
Pde6bP23440 Gm38017-201ENSMUST00000194768 695 ntBASIC12.65□□□□□ -0.38
Pde6bP23440 Gm37287-201ENSMUST00000195449 695 ntBASIC12.65□□□□□ -0.38
Pde6bP23440 Gm37793-201ENSMUST00000195548 695 ntBASIC12.65□□□□□ -0.38
Pde6bP23440 Gm42657-201ENSMUST00000201746 211 ntBASIC12.65□□□□□ -0.38
Pde6bP23440 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.65□□□□□ -0.38
Pde6bP23440 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC12.65□□□□□ -0.38
Pde6bP23440 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.65□□□□□ -0.38
Pde6bP23440 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.65□□□□□ -0.38
Pde6bP23440 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.65□□□□□ -0.38
Pde6bP23440 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pde6bP23440 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pde6bP23440 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pde6bP23440 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pde6bP23440 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pde6bP23440 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pde6bP23440 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6bP23440 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6bP23440 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6bP23440 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.64□□□□□ -0.39
Pde6bP23440 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6bP23440 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pde6bP23440 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6bP23440 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.64□□□□□ -0.39
Pde6bP23440 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6bP23440 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pde6bP23440 Gm11675-201ENSMUST00000121873 832 ntBASIC12.64□□□□□ -0.39
Pde6bP23440 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.64□□□□□ -0.39
Pde6bP23440 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6bP23440 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pde6bP23440 Gm28388-201ENSMUST00000186262 437 ntBASIC12.64□□□□□ -0.39
Pde6bP23440 Gm37458-201ENSMUST00000194055 410 ntBASIC12.64□□□□□ -0.39
Pde6bP23440 Gm3793-201ENSMUST00000204973 672 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms