Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Hoxc6P10629 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc6P10629 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc6P10629 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc6P10629 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hoxc6P10629 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.76□□□□□ -0.37
Hoxc6P10629 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.76□□□□□ -0.37
Hoxc6P10629 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.76□□□□□ -0.37
Hoxc6P10629 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Gm23612-201ENSMUST00000103823 110 ntBASIC12.76□□□□□ -0.37
Hoxc6P10629 Gm25562-201ENSMUST00000104608 133 ntBASIC12.76□□□□□ -0.37
Hoxc6P10629 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Gm13284-201ENSMUST00000121020 547 ntBASIC12.76□□□□□ -0.37
Hoxc6P10629 Gm14165-201ENSMUST00000121456 952 ntBASIC12.76□□□□□ -0.37
Hoxc6P10629 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Hoxc6P10629 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.76□□□□□ -0.37
Hoxc6P10629 Gm23576-201ENSMUST00000179918 110 ntBASIC12.76□□□□□ -0.37
Hoxc6P10629 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Gm26976-201ENSMUST00000182929 908 ntBASIC12.76□□□□□ -0.37
Hoxc6P10629 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Gm45135-201ENSMUST00000206787 1184 ntBASIC12.76□□□□□ -0.37
Hoxc6P10629 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Hoxc6P10629 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Hoxc6P10629 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Hoxc6P10629 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Hoxc6P10629 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.76□□□□□ -0.37
Hoxc6P10629 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Hoxc6P10629 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Hoxc6P10629 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Hoxc6P10629 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.75□□□□□ -0.37
Hoxc6P10629 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc6P10629 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc6P10629 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc6P10629 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc6P10629 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc6P10629 Gm11957-201ENSMUST00000118304 779 ntBASIC12.75□□□□□ -0.37
Hoxc6P10629 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc6P10629 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.75□□□□□ -0.37
Hoxc6P10629 Gm15196-201ENSMUST00000121406 482 ntBASIC12.75□□□□□ -0.37
Hoxc6P10629 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc6P10629 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc6P10629 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc6P10629 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.75□□□□□ -0.37
Hoxc6P10629 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc6P10629 Gm24328-201ENSMUST00000175104 67 ntBASIC12.75□□□□□ -0.37
Hoxc6P10629 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Hoxc6P10629 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Hoxc6P10629 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Hoxc6P10629 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Hoxc6P10629 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Hoxc6P10629 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Hoxc6P10629 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Hoxc6P10629 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.75□□□□□ -0.37
Hoxc6P10629 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.75□□□□□ -0.37
Hoxc6P10629 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Hoxc6P10629 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC12.75□□□□□ -0.37
Hoxc6P10629 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.75□□□□□ -0.37
Hoxc6P10629 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.75□□□□□ -0.37
Hoxc6P10629 Gm45856-201ENSMUST00000212752 416 ntBASIC12.75□□□□□ -0.37
Hoxc6P10629 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc6P10629 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.75□□□□□ -0.37
Hoxc6P10629 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc6P10629 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc6P10629 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc6P10629 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc6P10629 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc6P10629 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc6P10629 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc6P10629 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Hoxc6P10629 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc6P10629 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc6P10629 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.75□□□□□ -0.37
Hoxc6P10629 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc6P10629 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms