Protein–RNA interactions for Protein: P09925

Surf1, Surfeit locus protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf1P09925 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.02□□□□□ -0.33
Surf1P09925 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.02□□□□□ -0.33
Surf1P09925 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.02□□□□□ -0.33
Surf1P09925 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.02□□□□□ -0.33
Surf1P09925 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Surf1P09925 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.02□□□□□ -0.33
Surf1P09925 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.02□□□□□ -0.33
Surf1P09925 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.02□□□□□ -0.33
Surf1P09925 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Surf1P09925 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Surf1P09925 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Surf1P09925 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
Surf1P09925 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Surf1P09925 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Surf1P09925 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Surf1P09925 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Surf1P09925 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Surf1P09925 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Surf1P09925 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Surf1P09925 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Surf1P09925 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Surf1P09925 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Surf1P09925 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Surf1P09925 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Surf1P09925 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Surf1P09925 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Surf1P09925 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.02□□□□□ -0.33
Surf1P09925 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Surf1P09925 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
Surf1P09925 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Surf1P09925 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Surf1P09925 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Surf1P09925 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Surf1P09925 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Surf1P09925 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Surf1P09925 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Surf1P09925 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC13.01□□□□□ -0.33
Surf1P09925 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC13.01□□□□□ -0.33
Surf1P09925 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Surf1P09925 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Surf1P09925 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Gm13461-201ENSMUST00000120980 662 ntBASIC13.01□□□□□ -0.33
Surf1P09925 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Surf1P09925 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Gm38117-201ENSMUST00000194653 939 ntBASIC13.01□□□□□ -0.33
Surf1P09925 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Surf1P09925 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.01□□□□□ -0.33
Surf1P09925 Gm45575-201ENSMUST00000210283 548 ntBASIC13.01□□□□□ -0.33
Surf1P09925 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Surf1P09925 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.01□□□□□ -0.33
Surf1P09925 Gm1821-202ENSMUST00000227415 750 ntBASIC13.01□□□□□ -0.33
Surf1P09925 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Ntng1-201ENSMUST00000051253 327 ntBASIC13.01□□□□□ -0.33
Surf1P09925 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Surf1P09925 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.01□□□□□ -0.33
Surf1P09925 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Surf1P09925 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC13.01□□□□□ -0.33
Surf1P09925 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Surf1P09925 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Surf1P09925 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Surf1P09925 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Surf1P09925 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC13□□□□□ -0.33
Surf1P09925 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Surf1P09925 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Surf1P09925 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC13□□□□□ -0.33
Surf1P09925 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Surf1P09925 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13□□□□□ -0.33
Surf1P09925 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Surf1P09925 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Surf1P09925 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Surf1P09925 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Surf1P09925 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Surf1P09925 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC13□□□□□ -0.33
Surf1P09925 Mir680-2-201ENSMUST00000102163 110 ntBASIC13□□□□□ -0.33
Surf1P09925 Gm23251-201ENSMUST00000103773 110 ntBASIC13□□□□□ -0.33
Surf1P09925 Gm11331-201ENSMUST00000119764 288 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms