Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc9P09633 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hoxc9P09633 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc9P09633 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Hoxc9P09633 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc9P09633 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Hoxc9P09633 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc9P09633 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc9P09633 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc9P09633 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc9P09633 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc9P09633 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc9P09633 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Hoxc9P09633 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc9P09633 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Hoxc9P09633 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc9P09633 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Hoxc9P09633 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc9P09633 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc9P09633 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc9P09633 Gm14398-201ENSMUST00000117287 1073 ntBASIC14.85□□□□□ -0.03
Hoxc9P09633 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc9P09633 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC14.85□□□□□ -0.03
Hoxc9P09633 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc9P09633 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC14.85□□□□□ -0.03
Hoxc9P09633 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Hoxc9P09633 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC14.85□□□□□ -0.03
Hoxc9P09633 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc9P09633 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc9P09633 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc9P09633 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC14.85□□□□□ -0.03
Hoxc9P09633 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc9P09633 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc9P09633 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Hoxc9P09633 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Hoxc9P09633 Gm45416-201ENSMUST00000209713 2201 ntBASIC14.85□□□□□ -0.03
Hoxc9P09633 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Hoxc9P09633 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxc9P09633 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Hoxc9P09633 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc9P09633 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc9P09633 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc9P09633 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc9P09633 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc9P09633 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc9P09633 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc9P09633 Gm9544-201ENSMUST00000223349 2482 ntBASIC14.84□□□□□ -0.03
Hoxc9P09633 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc9P09633 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc9P09633 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc9P09633 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc9P09633 Gm23612-201ENSMUST00000103823 110 ntBASIC14.84□□□□□ -0.03
Hoxc9P09633 Gm11996-201ENSMUST00000117538 915 ntBASIC14.84□□□□□ -0.03
Hoxc9P09633 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC14.84□□□□□ -0.03
Hoxc9P09633 Gm12943-201ENSMUST00000119616 210 ntBASIC14.84□□□□□ -0.03
Hoxc9P09633 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc9P09633 Gm15196-201ENSMUST00000121406 482 ntBASIC14.84□□□□□ -0.03
Hoxc9P09633 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC14.84□□□□□ -0.03
Hoxc9P09633 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc9P09633 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc9P09633 Gm23576-201ENSMUST00000179918 110 ntBASIC14.84□□□□□ -0.03
Hoxc9P09633 Mrip-ps-201ENSMUST00000184613 940 ntBASIC14.84□□□□□ -0.03
Hoxc9P09633 Gm18801-201ENSMUST00000186616 536 ntBASIC14.84□□□□□ -0.03
Hoxc9P09633 Gm31274-201ENSMUST00000197356 229 ntBASIC14.84□□□□□ -0.03
Hoxc9P09633 Gm42660-201ENSMUST00000197733 947 ntBASIC14.84□□□□□ -0.03
Hoxc9P09633 Gm9353-201ENSMUST00000200472 604 ntBASIC14.84□□□□□ -0.03
Hoxc9P09633 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC14.84□□□□□ -0.03
Hoxc9P09633 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC14.84□□□□□ -0.03
Hoxc9P09633 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Hoxc9P09633 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
Hoxc9P09633 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc9P09633 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc9P09633 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc9P09633 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc9P09633 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC14.84□□□□□ -0.03
Hoxc9P09633 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc9P09633 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Hoxc9P09633 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Hoxc9P09633 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC14.84□□□□□ -0.03
Hoxc9P09633 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC14.84□□□□□ -0.03
Hoxc9P09633 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC14.84□□□□□ -0.03
Hoxc9P09633 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc9P09633 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc9P09633 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hoxc9P09633 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.03
Hoxc9P09633 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hoxc9P09633 Gm43102-201ENSMUST00000201004 2324 ntBASIC14.83□□□□□ -0.03
Hoxc9P09633 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Hoxc9P09633 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hoxc9P09633 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hoxc9P09633 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc9P09633 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc9P09633 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc9P09633 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc9P09633 Gm6157-201ENSMUST00000199935 1897 ntBASIC14.83□□□□□ -0.04
Hoxc9P09633 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc9P09633 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc9P09633 Gm13981-201ENSMUST00000122360 447 ntBASIC14.83□□□□□ -0.04
Hoxc9P09633 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC14.83□□□□□ -0.04
Hoxc9P09633 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms