Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm44980-201ENSMUST00000205826 314 ntBASIC11.36□□□□□ -0.59
Hoxa4P06798 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.36□□□□□ -0.59
Hoxa4P06798 Gm45550-201ENSMUST00000209380 946 ntBASIC11.36□□□□□ -0.59
Hoxa4P06798 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa4P06798 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.36□□□□□ -0.59
Hoxa4P06798 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.36□□□□□ -0.59
Hoxa4P06798 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa4P06798 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.36□□□□□ -0.59
Hoxa4P06798 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Hoxa4P06798 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa4P06798 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa4P06798 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.36□□□□□ -0.59
Hoxa4P06798 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa4P06798 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa4P06798 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Hoxa4P06798 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa4P06798 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hoxa4P06798 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Hoxa4P06798 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.35□□□□□ -0.59
Hoxa4P06798 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Hoxa4P06798 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.35□□□□□ -0.59
Hoxa4P06798 Gm15528-201ENSMUST00000117821 864 ntBASIC11.35□□□□□ -0.59
Hoxa4P06798 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.35□□□□□ -0.59
Hoxa4P06798 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.35□□□□□ -0.59
Hoxa4P06798 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.35□□□□□ -0.59
Hoxa4P06798 Gm25492-201ENSMUST00000157383 129 ntBASIC11.35□□□□□ -0.59
Hoxa4P06798 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Hoxa4P06798 Gm21778-201ENSMUST00000178779 471 ntBASIC11.35□□□□□ -0.59
Hoxa4P06798 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.35□□□□□ -0.59
Hoxa4P06798 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.35□□□□□ -0.59
Hoxa4P06798 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.35□□□□□ -0.59
Hoxa4P06798 Gm9645-201ENSMUST00000197131 792 ntBASIC11.35□□□□□ -0.59
Hoxa4P06798 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.35□□□□□ -0.59
Hoxa4P06798 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.35□□□□□ -0.59
Hoxa4P06798 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.35□□□□□ -0.59
Hoxa4P06798 Gm10179-201ENSMUST00000086233 688 ntBASIC11.35□□□□□ -0.59
Hoxa4P06798 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Hoxa4P06798 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.35□□□□□ -0.59
Hoxa4P06798 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Hoxa4P06798 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.35□□□□□ -0.59
Hoxa4P06798 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa4P06798 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Hoxa4P06798 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Hoxa4P06798 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Hoxa4P06798 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Hoxa4P06798 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.34□□□□□ -0.59
Hoxa4P06798 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.34□□□□□ -0.59
Hoxa4P06798 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.34□□□□□ -0.59
Hoxa4P06798 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Hoxa4P06798 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Hoxa4P06798 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
Hoxa4P06798 Gm14263-201ENSMUST00000117955 746 ntBASIC11.34□□□□□ -0.59
Hoxa4P06798 Gm16166-201ENSMUST00000118291 787 ntBASIC11.34□□□□□ -0.59
Hoxa4P06798 Gm16071-201ENSMUST00000119589 793 ntBASIC11.34□□□□□ -0.59
Hoxa4P06798 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.34□□□□□ -0.59
Hoxa4P06798 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.34□□□□□ -0.59
Hoxa4P06798 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.34□□□□□ -0.59
Hoxa4P06798 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa4P06798 Mir1943-201ENSMUST00000158276 73 ntBASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms