Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CopeO89079 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.85□□□□□ -0.51
CopeO89079 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopeO89079 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopeO89079 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopeO89079 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.85□□□□□ -0.51
CopeO89079 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CopeO89079 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopeO89079 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CopeO89079 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CopeO89079 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CopeO89079 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
CopeO89079 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.84□□□□□ -0.51
CopeO89079 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
CopeO89079 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
CopeO89079 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.84□□□□□ -0.51
CopeO89079 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.84□□□□□ -0.51
CopeO89079 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.84□□□□□ -0.51
CopeO89079 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.84□□□□□ -0.51
CopeO89079 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.84□□□□□ -0.51
CopeO89079 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.84□□□□□ -0.51
CopeO89079 Rprl1-202ENSMUST00000198476 238 ntBASIC11.84□□□□□ -0.51
CopeO89079 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
CopeO89079 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CopeO89079 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CopeO89079 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CopeO89079 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CopeO89079 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
CopeO89079 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Btrc-209ENSMUST00000224478 2194 ntBASIC11.84□□□□□ -0.51
CopeO89079 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CopeO89079 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
CopeO89079 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
CopeO89079 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CopeO89079 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CopeO89079 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.83□□□□□ -0.52
CopeO89079 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.83□□□□□ -0.52
CopeO89079 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.83□□□□□ -0.52
CopeO89079 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
CopeO89079 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
CopeO89079 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
CopeO89079 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
CopeO89079 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
CopeO89079 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
CopeO89079 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CopeO89079 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.83□□□□□ -0.52
CopeO89079 Gm14071-201ENSMUST00000117817 509 ntBASIC11.83□□□□□ -0.52
CopeO89079 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.83□□□□□ -0.52
CopeO89079 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.83□□□□□ -0.52
CopeO89079 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.83□□□□□ -0.52
CopeO89079 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CopeO89079 Gm38117-201ENSMUST00000194653 939 ntBASIC11.83□□□□□ -0.52
CopeO89079 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.83□□□□□ -0.52
CopeO89079 Gm18054-201ENSMUST00000207539 555 ntBASIC11.83□□□□□ -0.52
CopeO89079 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.83□□□□□ -0.52
CopeO89079 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms