Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.06□□□□□ -0.64
Hcn1O88704 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.06□□□□□ -0.64
Hcn1O88704 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Hcn1O88704 Gm15610-201ENSMUST00000120584 195 ntBASIC11.06□□□□□ -0.64
Hcn1O88704 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.06□□□□□ -0.64
Hcn1O88704 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.06□□□□□ -0.64
Hcn1O88704 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.06□□□□□ -0.64
Hcn1O88704 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.06□□□□□ -0.64
Hcn1O88704 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
Hcn1O88704 Gm5706-201ENSMUST00000181525 993 ntBASIC11.06□□□□□ -0.64
Hcn1O88704 Gm18827-201ENSMUST00000188341 790 ntBASIC11.06□□□□□ -0.64
Hcn1O88704 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Gm18893-201ENSMUST00000198416 943 ntBASIC11.06□□□□□ -0.64
Hcn1O88704 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Gm4157-201ENSMUST00000211647 679 ntBASIC11.06□□□□□ -0.64
Hcn1O88704 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.06□□□□□ -0.64
Hcn1O88704 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.06□□□□□ -0.64
Hcn1O88704 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.06□□□□□ -0.64
Hcn1O88704 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Hcn1O88704 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.06□□□□□ -0.64
Hcn1O88704 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Hcn1O88704 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hcn1O88704 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Hcn1O88704 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hcn1O88704 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.05□□□□□ -0.64
Hcn1O88704 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hcn1O88704 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hcn1O88704 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hcn1O88704 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hcn1O88704 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Hcn1O88704 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hcn1O88704 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Hcn1O88704 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.05□□□□□ -0.64
Hcn1O88704 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hcn1O88704 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hcn1O88704 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Hcn1O88704 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Hcn1O88704 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hcn1O88704 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.05□□□□□ -0.64
Hcn1O88704 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.05□□□□□ -0.64
Hcn1O88704 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Hcn1O88704 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hcn1O88704 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hcn1O88704 Gm8343-201ENSMUST00000182705 994 ntBASIC11.05□□□□□ -0.64
Hcn1O88704 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Hcn1O88704 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hcn1O88704 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hcn1O88704 Gm26448-201ENSMUST00000082446 203 ntBASIC11.05□□□□□ -0.64
Hcn1O88704 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hcn1O88704 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hcn1O88704 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hcn1O88704 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hcn1O88704 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hcn1O88704 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hcn1O88704 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.05□□□□□ -0.64
Hcn1O88704 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.05□□□□□ -0.64
Hcn1O88704 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hcn1O88704 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hcn1O88704 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hcn1O88704 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hcn1O88704 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.04□□□□□ -0.64
Hcn1O88704 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.04□□□□□ -0.64
Hcn1O88704 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Hcn1O88704 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Hcn1O88704 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.04□□□□□ -0.64
Hcn1O88704 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.04□□□□□ -0.64
Hcn1O88704 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Hcn1O88704 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hcn1O88704 Gm23596-201ENSMUST00000104304 132 ntBASIC11.04□□□□□ -0.64
Hcn1O88704 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Hcn1O88704 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms