Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chrna4O70174 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chrna4O70174 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chrna4O70174 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.61□□□□□ -0.55
Chrna4O70174 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Chrna4O70174 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chrna4O70174 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chrna4O70174 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chrna4O70174 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chrna4O70174 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chrna4O70174 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chrna4O70174 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chrna4O70174 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chrna4O70174 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Chrna4O70174 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chrna4O70174 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chrna4O70174 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Chrna4O70174 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chrna4O70174 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Chrna4O70174 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Chrna4O70174 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.6□□□□□ -0.55
Chrna4O70174 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Chrna4O70174 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.6□□□□□ -0.55
Chrna4O70174 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Chrna4O70174 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 Gm24844-201ENSMUST00000158679 127 ntBASIC11.6□□□□□ -0.55
Chrna4O70174 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Chrna4O70174 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.6□□□□□ -0.55
Chrna4O70174 Gm12407-201ENSMUST00000180219 324 ntBASIC11.6□□□□□ -0.55
Chrna4O70174 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.6□□□□□ -0.55
Chrna4O70174 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.6□□□□□ -0.55
Chrna4O70174 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.6□□□□□ -0.55
Chrna4O70174 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 Ginm1-202ENSMUST00000065124 300 ntBASIC11.6□□□□□ -0.55
Chrna4O70174 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Chrna4O70174 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Chrna4O70174 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Chrna4O70174 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Chrna4O70174 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.59□□□□□ -0.55
Chrna4O70174 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.59□□□□□ -0.55
Chrna4O70174 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chrna4O70174 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Chrna4O70174 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Chrna4O70174 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chrna4O70174 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chrna4O70174 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chrna4O70174 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Chrna4O70174 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chrna4O70174 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Chrna4O70174 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.59□□□□□ -0.55
Chrna4O70174 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chrna4O70174 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chrna4O70174 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Chrna4O70174 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Chrna4O70174 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Chrna4O70174 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chrna4O70174 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.59□□□□□ -0.55
Chrna4O70174 Gm18367-201ENSMUST00000176139 600 ntBASIC11.59□□□□□ -0.55
Chrna4O70174 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.59□□□□□ -0.55
Chrna4O70174 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.59□□□□□ -0.55
Chrna4O70174 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.59□□□□□ -0.55
Chrna4O70174 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.59□□□□□ -0.55
Chrna4O70174 Gm7504-201ENSMUST00000201449 424 ntBASIC11.59□□□□□ -0.55
Chrna4O70174 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.59□□□□□ -0.55
Chrna4O70174 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chrna4O70174 Gm6722-201ENSMUST00000221586 390 ntBASIC11.59□□□□□ -0.55
Chrna4O70174 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.59□□□□□ -0.55
Chrna4O70174 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.59□□□□□ -0.55
Chrna4O70174 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chrna4O70174 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Chrna4O70174 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chrna4O70174 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Chrna4O70174 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Chrna4O70174 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chrna4O70174 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Chrna4O70174 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Chrna4O70174 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 131.8 ms