Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trdmt1O55055 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.68□□□□□ -0.38
Trdmt1O55055 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.68□□□□□ -0.38
Trdmt1O55055 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Gm11619-201ENSMUST00000117474 237 ntBASIC12.68□□□□□ -0.38
Trdmt1O55055 Gm25545-201ENSMUST00000122673 323 ntBASIC12.68□□□□□ -0.38
Trdmt1O55055 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.68□□□□□ -0.38
Trdmt1O55055 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC12.68□□□□□ -0.38
Trdmt1O55055 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trdmt1O55055 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Olfml3-204ENSMUST00000169286 874 ntBASIC12.68□□□□□ -0.38
Trdmt1O55055 Gm17070-201ENSMUST00000170463 784 ntBASIC12.68□□□□□ -0.38
Trdmt1O55055 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trdmt1O55055 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.68□□□□□ -0.38
Trdmt1O55055 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.68□□□□□ -0.38
Trdmt1O55055 AC122035.1-201ENSMUST00000227576 1016 ntBASIC12.68□□□□□ -0.38
Trdmt1O55055 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trdmt1O55055 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trdmt1O55055 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trdmt1O55055 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trdmt1O55055 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdmt1O55055 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trdmt1O55055 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trdmt1O55055 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdmt1O55055 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.67□□□□□ -0.38
Trdmt1O55055 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdmt1O55055 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trdmt1O55055 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdmt1O55055 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trdmt1O55055 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdmt1O55055 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdmt1O55055 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trdmt1O55055 Gm14274-201ENSMUST00000117182 615 ntBASIC12.67□□□□□ -0.38
Trdmt1O55055 Gm14234-201ENSMUST00000119539 845 ntBASIC12.67□□□□□ -0.38
Trdmt1O55055 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.67□□□□□ -0.38
Trdmt1O55055 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trdmt1O55055 Gm26976-201ENSMUST00000182929 908 ntBASIC12.67□□□□□ -0.38
Trdmt1O55055 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trdmt1O55055 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdmt1O55055 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.67□□□□□ -0.38
Trdmt1O55055 Gm2594-201ENSMUST00000214774 742 ntBASIC12.67□□□□□ -0.38
Trdmt1O55055 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.67□□□□□ -0.38
Trdmt1O55055 Gm8255-201ENSMUST00000218693 305 ntBASIC12.67□□□□□ -0.38
Trdmt1O55055 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC12.67□□□□□ -0.38
Trdmt1O55055 CT030166.5-201ENSMUST00000222249 420 ntBASIC12.67□□□□□ -0.38
Trdmt1O55055 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trdmt1O55055 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdmt1O55055 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdmt1O55055 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdmt1O55055 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Trdmt1O55055 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdmt1O55055 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdmt1O55055 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdmt1O55055 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trdmt1O55055 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trdmt1O55055 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdmt1O55055 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.67□□□□□ -0.38
Trdmt1O55055 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdmt1O55055 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdmt1O55055 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trdmt1O55055 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trdmt1O55055 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdmt1O55055 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdmt1O55055 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trdmt1O55055 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdmt1O55055 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trdmt1O55055 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trdmt1O55055 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.66□□□□□ -0.38
Trdmt1O55055 Gm12389-201ENSMUST00000117696 418 ntBASIC12.66□□□□□ -0.38
Trdmt1O55055 Gm9133-201ENSMUST00000118289 540 ntBASIC12.66□□□□□ -0.38
Trdmt1O55055 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trdmt1O55055 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trdmt1O55055 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trdmt1O55055 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC12.66□□□□□ -0.38
Trdmt1O55055 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.66□□□□□ -0.38
Trdmt1O55055 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trdmt1O55055 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trdmt1O55055 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms