Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Polr1aO35134 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC17.43■□□□□ 0.38
Polr1aO35134 Gm6630-201ENSMUST00000119199 454 ntBASIC17.43■□□□□ 0.38
Polr1aO35134 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Polr1aO35134 Gm43172-201ENSMUST00000202139 2137 ntBASIC17.43■□□□□ 0.38
Polr1aO35134 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC17.43■□□□□ 0.38
Polr1aO35134 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC17.43■□□□□ 0.38
Polr1aO35134 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Polr1aO35134 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Polr1aO35134 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Polr1aO35134 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Polr1aO35134 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Polr1aO35134 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC17.42■□□□□ 0.38
Polr1aO35134 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Polr1aO35134 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr1aO35134 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr1aO35134 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr1aO35134 AC156031.2-201ENSMUST00000213107 3310 ntBASIC17.42■□□□□ 0.38
Polr1aO35134 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Polr1aO35134 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Polr1aO35134 Gm15707-201ENSMUST00000118804 996 ntBASIC17.42■□□□□ 0.38
Polr1aO35134 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC17.42■□□□□ 0.38
Polr1aO35134 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Polr1aO35134 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC17.42■□□□□ 0.38
Polr1aO35134 Gm43460-201ENSMUST00000202491 1057 ntBASIC17.42■□□□□ 0.38
Polr1aO35134 Gm44640-201ENSMUST00000206894 247 ntBASIC17.42■□□□□ 0.38
Polr1aO35134 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Polr1aO35134 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Polr1aO35134 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr1aO35134 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Polr1aO35134 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr1aO35134 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Polr1aO35134 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr1aO35134 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr1aO35134 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr1aO35134 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr1aO35134 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Polr1aO35134 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Polr1aO35134 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Polr1aO35134 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr1aO35134 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Polr1aO35134 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Polr1aO35134 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC17.42■□□□□ 0.38
Polr1aO35134 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Polr1aO35134 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Polr1aO35134 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Polr1aO35134 Gm23595-201ENSMUST00000104306 130 ntBASIC17.41■□□□□ 0.38
Polr1aO35134 Gm5764-201ENSMUST00000118817 885 ntBASIC17.41■□□□□ 0.38
Polr1aO35134 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC17.41■□□□□ 0.38
Polr1aO35134 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Polr1aO35134 Gm5526-201ENSMUST00000153604 423 ntBASIC17.41■□□□□ 0.38
Polr1aO35134 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Polr1aO35134 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC17.41■□□□□ 0.38
Polr1aO35134 Gm8234-201ENSMUST00000198523 1107 ntBASIC17.41■□□□□ 0.38
Polr1aO35134 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC17.41■□□□□ 0.38
Polr1aO35134 Gm9204-201ENSMUST00000212641 947 ntBASIC17.41■□□□□ 0.38
Polr1aO35134 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Polr1aO35134 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Polr1aO35134 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Polr1aO35134 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.41■□□□□ 0.38
Polr1aO35134 Gm7405-201ENSMUST00000121476 1337 ntBASIC17.41■□□□□ 0.38
Polr1aO35134 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Polr1aO35134 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Polr1aO35134 Olfr160-202ENSMUST00000211952 3492 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Polr1aO35134 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Polr1aO35134 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Polr1aO35134 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Polr1aO35134 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Polr1aO35134 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC17.41■□□□□ 0.38
Polr1aO35134 CT025624.1-201ENSMUST00000224007 2700 ntBASIC17.41■□□□□ 0.38
Polr1aO35134 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Polr1aO35134 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Polr1aO35134 Gm19027-201ENSMUST00000187291 1355 ntBASIC17.41■□□□□ 0.38
Polr1aO35134 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC17.41■□□□□ 0.38
Polr1aO35134 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Polr1aO35134 Gm8659-201ENSMUST00000120024 1084 ntBASIC17.41■□□□□ 0.38
Polr1aO35134 n-R5s130-201ENSMUST00000178128 119 ntBASIC17.41■□□□□ 0.38
Polr1aO35134 Gm24312-201ENSMUST00000178677 119 ntBASIC17.41■□□□□ 0.38
Polr1aO35134 n-R5s106-201ENSMUST00000179060 119 ntBASIC17.41■□□□□ 0.38
Polr1aO35134 n-R5s118-201ENSMUST00000179887 119 ntBASIC17.41■□□□□ 0.38
Polr1aO35134 Gm27316-201ENSMUST00000184884 277 ntBASIC17.41■□□□□ 0.38
Polr1aO35134 Gm7255-201ENSMUST00000187371 908 ntBASIC17.41■□□□□ 0.38
Polr1aO35134 Gm6518-201ENSMUST00000208450 342 ntBASIC17.41■□□□□ 0.38
Polr1aO35134 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Polr1aO35134 Gm18042-201ENSMUST00000219887 790 ntBASIC17.41■□□□□ 0.38
Polr1aO35134 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Polr1aO35134 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Polr1aO35134 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Polr1aO35134 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Polr1aO35134 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Polr1aO35134 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Polr1aO35134 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Polr1aO35134 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Polr1aO35134 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Polr1aO35134 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Polr1aO35134 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Polr1aO35134 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Polr1aO35134 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Polr1aO35134 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Polr1aO35134 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms