Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.02□□□□□ -0.49
Ebf3O08791 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ebf3O08791 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf3O08791 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Ebf3O08791 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf3O08791 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf3O08791 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf3O08791 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf3O08791 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf3O08791 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.01□□□□□ -0.49
Ebf3O08791 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ebf3O08791 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf3O08791 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.01□□□□□ -0.49
Ebf3O08791 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.01□□□□□ -0.49
Ebf3O08791 Gm6450-201ENSMUST00000200896 574 ntBASIC12.01□□□□□ -0.49
Ebf3O08791 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ebf3O08791 Gm6108-201ENSMUST00000208365 367 ntBASIC12.01□□□□□ -0.49
Ebf3O08791 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.01□□□□□ -0.49
Ebf3O08791 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf3O08791 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ebf3O08791 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ebf3O08791 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf3O08791 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf3O08791 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.01□□□□□ -0.49
Ebf3O08791 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf3O08791 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf3O08791 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf3O08791 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.01□□□□□ -0.49
Ebf3O08791 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf3O08791 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Ebf3O08791 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf3O08791 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf3O08791 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf3O08791 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf3O08791 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.01□□□□□ -0.49
Ebf3O08791 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.01□□□□□ -0.49
Ebf3O08791 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf3O08791 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.01□□□□□ -0.49
Ebf3O08791 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ebf3O08791 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12□□□□□ -0.49
Ebf3O08791 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ebf3O08791 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Ebf3O08791 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Gm36957-201ENSMUST00000192982 2824 ntBASIC12□□□□□ -0.49
Ebf3O08791 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ebf3O08791 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12□□□□□ -0.49
Ebf3O08791 Gm7940-201ENSMUST00000218195 769 ntBASIC12□□□□□ -0.49
Ebf3O08791 CT025553.1-201ENSMUST00000226292 299 ntBASIC12□□□□□ -0.49
Ebf3O08791 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Gm25517-201ENSMUST00000083865 134 ntBASIC12□□□□□ -0.49
Ebf3O08791 n-R5s211-201ENSMUST00000093689 119 ntBASIC12□□□□□ -0.49
Ebf3O08791 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Ebf3O08791 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Ebf3O08791 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ebf3O08791 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ebf3O08791 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Ebf3O08791 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Ebf3O08791 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ebf3O08791 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Ebf3O08791 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Ebf3O08791 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ebf3O08791 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Ebf3O08791 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ebf3O08791 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf3O08791 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.99□□□□□ -0.49
Ebf3O08791 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf3O08791 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf3O08791 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms