Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Gm13297-201ENSMUST00000120205 934 ntBASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Gm43133-201ENSMUST00000197472 463 ntBASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.48□□□□□ -0.73
Shisa8J3QNX5 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Shisa8J3QNX5 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Gm14644-201ENSMUST00000116671 647 ntBASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Gm13226-201ENSMUST00000117838 404 ntBASIC10.47□□□□□ -0.73
Shisa8J3QNX5 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Mospd4-201ENSMUST00000180618 576 ntBASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Gm27514-201ENSMUST00000183692 110 ntBASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.47□□□□□ -0.73
Shisa8J3QNX5 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Shisa8J3QNX5 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Shisa8J3QNX5 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Shisa8J3QNX5 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Shisa8J3QNX5 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Shisa8J3QNX5 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
Shisa8J3QNX5 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Shisa8J3QNX5 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Shisa8J3QNX5 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Shisa8J3QNX5 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Shisa8J3QNX5 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
Shisa8J3QNX5 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Shisa8J3QNX5 Gm15004-201ENSMUST00000119192 630 ntBASIC10.46□□□□□ -0.73
Shisa8J3QNX5 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Shisa8J3QNX5 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Shisa8J3QNX5 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Shisa8J3QNX5 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms