Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc180J3QNE4 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Ccdc180J3QNE4 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC20.75■□□□□ 0.91
Ccdc180J3QNE4 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc180J3QNE4 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc180J3QNE4 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc180J3QNE4 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc180J3QNE4 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Ccdc180J3QNE4 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Ccdc180J3QNE4 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc180J3QNE4 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc180J3QNE4 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc180J3QNE4 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC20.75■□□□□ 0.91
Ccdc180J3QNE4 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc180J3QNE4 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc180J3QNE4 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc180J3QNE4 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ccdc180J3QNE4 Gm14005-209ENSMUST00000224993 1832 ntBASIC20.75■□□□□ 0.91
Ccdc180J3QNE4 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Gm13204-201ENSMUST00000120110 821 ntBASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Gm4917-201ENSMUST00000121452 650 ntBASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Gm17221-201ENSMUST00000163909 481 ntBASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Gm17073-201ENSMUST00000168069 556 ntBASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Gm37197-201ENSMUST00000195607 401 ntBASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Gm10580-201ENSMUST00000097985 396 ntBASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Gm10582-201ENSMUST00000097987 396 ntBASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Gm10583-201ENSMUST00000097988 396 ntBASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Gm42970-201ENSMUST00000196407 1352 ntBASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Gm43152-201ENSMUST00000202495 1638 ntBASIC20.74■□□□□ 0.91
Ccdc180J3QNE4 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 Gm5944-201ENSMUST00000118182 1001 ntBASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 Gm43854-201ENSMUST00000200418 394 ntBASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 Gm44605-201ENSMUST00000206892 949 ntBASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 Gm45776-201ENSMUST00000212366 1522 ntBASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 Gm13094-201ENSMUST00000117930 409 ntBASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ccdc180J3QNE4 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc180J3QNE4 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc180J3QNE4 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc180J3QNE4 AC022682.1-201ENSMUST00000224624 2023 ntBASIC20.72■□□□□ 0.91
Ccdc180J3QNE4 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc180J3QNE4 Gm12912-201ENSMUST00000121596 1381 ntBASIC20.72■□□□□ 0.91
Ccdc180J3QNE4 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Ccdc180J3QNE4 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc180J3QNE4 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc180J3QNE4 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC20.72■□□□□ 0.91
Ccdc180J3QNE4 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC20.72■□□□□ 0.91
Ccdc180J3QNE4 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc180J3QNE4 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Ccdc180J3QNE4 Gm9166-201ENSMUST00000120293 561 ntBASIC20.72■□□□□ 0.91
Ccdc180J3QNE4 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC20.72■□□□□ 0.91
Ccdc180J3QNE4 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc180J3QNE4 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ccdc180J3QNE4 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc180J3QNE4 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc180J3QNE4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc180J3QNE4 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc180J3QNE4 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc180J3QNE4 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccdc180J3QNE4 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ccdc180J3QNE4 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc180J3QNE4 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ccdc180J3QNE4 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc180J3QNE4 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc180J3QNE4 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc180J3QNE4 Gm24954-201ENSMUST00000178831 110 ntBASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms