Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 Arhgef3-204ENSMUST00000225949 3198 ntBASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 Gm12712-201ENSMUST00000120676 801 ntBASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 Gm33080-201ENSMUST00000205429 172 ntBASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 Gm6831-202ENSMUST00000213025 1673 ntBASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcf11G3X9Z4 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Gm6606-201ENSMUST00000193613 947 ntBASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Gm43778-201ENSMUST00000199438 199 ntBASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 AC102847.1-202ENSMUST00000226313 1245 ntBASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Ntrk2-208ENSMUST00000225583 2719 ntBASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Gm11996-201ENSMUST00000117538 915 ntBASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Gm6758-201ENSMUST00000119643 1055 ntBASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Gm37452-201ENSMUST00000194416 1160 ntBASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Gm19817-201ENSMUST00000199764 2132 ntBASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Gm7880-201ENSMUST00000203748 871 ntBASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcf11G3X9Z4 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Pcf11G3X9Z4 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcf11G3X9Z4 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Pcf11G3X9Z4 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcf11G3X9Z4 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Pcf11G3X9Z4 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm43931-201ENSMUST00000204817 2870 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm22937-201ENSMUST00000103954 131 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm23400-201ENSMUST00000174994 102 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm26463-201ENSMUST00000175065 101 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm24332-201ENSMUST00000175102 102 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm25959-201ENSMUST00000175112 102 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm22475-201ENSMUST00000175169 102 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm22903-201ENSMUST00000175193 102 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm25070-201ENSMUST00000175237 102 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm24159-201ENSMUST00000175264 102 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm25299-201ENSMUST00000175283 102 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm23798-201ENSMUST00000175560 102 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm23802-201ENSMUST00000175565 102 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm25708-201ENSMUST00000177687 102 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm24370-201ENSMUST00000178007 102 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm23049-201ENSMUST00000178068 102 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm28019-201ENSMUST00000178138 101 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms