Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6F6VAN0 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6F6VAN0 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6F6VAN0 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Gm15515-201ENSMUST00000117827 822 ntBASIC11.84□□□□□ -0.51
Atf6F6VAN0 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.84□□□□□ -0.51
Atf6F6VAN0 Gm17040-202ENSMUST00000170597 889 ntBASIC11.84□□□□□ -0.51
Atf6F6VAN0 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.84□□□□□ -0.51
Atf6F6VAN0 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Gm6867-201ENSMUST00000219165 425 ntBASIC11.84□□□□□ -0.51
Atf6F6VAN0 Gm17872-201ENSMUST00000222550 532 ntBASIC11.84□□□□□ -0.51
Atf6F6VAN0 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.84□□□□□ -0.51
Atf6F6VAN0 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.84□□□□□ -0.51
Atf6F6VAN0 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.84□□□□□ -0.51
Atf6F6VAN0 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.84□□□□□ -0.51
Atf6F6VAN0 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6F6VAN0 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.84□□□□□ -0.51
Atf6F6VAN0 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Atf6F6VAN0 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Atf6F6VAN0 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6F6VAN0 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6F6VAN0 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Atf6F6VAN0 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6F6VAN0 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Atf6F6VAN0 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6F6VAN0 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6F6VAN0 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.83□□□□□ -0.52
Atf6F6VAN0 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.83□□□□□ -0.52
Atf6F6VAN0 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6F6VAN0 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6F6VAN0 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6F6VAN0 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.83□□□□□ -0.52
Atf6F6VAN0 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6F6VAN0 Gm14028-201ENSMUST00000117434 479 ntBASIC11.83□□□□□ -0.52
Atf6F6VAN0 Gm12266-201ENSMUST00000120311 962 ntBASIC11.83□□□□□ -0.52
Atf6F6VAN0 Gm8199-201ENSMUST00000121323 823 ntBASIC11.83□□□□□ -0.52
Atf6F6VAN0 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6F6VAN0 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6F6VAN0 Gm24990-201ENSMUST00000157406 323 ntBASIC11.83□□□□□ -0.52
Atf6F6VAN0 Gm37720-201ENSMUST00000195497 1241 ntBASIC11.83□□□□□ -0.52
Atf6F6VAN0 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.83□□□□□ -0.52
Atf6F6VAN0 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6F6VAN0 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6F6VAN0 Mir433-201ENSMUST00000093564 124 ntBASIC11.83□□□□□ -0.52
Atf6F6VAN0 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Atf6F6VAN0 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Atf6F6VAN0 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.83□□□□□ -0.52
Atf6F6VAN0 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.83□□□□□ -0.52
Atf6F6VAN0 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6F6VAN0 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Atf6F6VAN0 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Atf6F6VAN0 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6F6VAN0 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6F6VAN0 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6F6VAN0 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6F6VAN0 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6F6VAN0 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6F6VAN0 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6F6VAN0 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6F6VAN0 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6F6VAN0 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6F6VAN0 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.82□□□□□ -0.52
Atf6F6VAN0 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6F6VAN0 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Atf6F6VAN0 Gm12579-201ENSMUST00000118040 783 ntBASIC11.82□□□□□ -0.52
Atf6F6VAN0 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Atf6F6VAN0 Gm13461-201ENSMUST00000120980 662 ntBASIC11.82□□□□□ -0.52
Atf6F6VAN0 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Atf6F6VAN0 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.82□□□□□ -0.52
Atf6F6VAN0 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.82□□□□□ -0.52
Atf6F6VAN0 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms