Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.28□□□□□ -0.6
Chd3B1AR17 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.28□□□□□ -0.6
Chd3B1AR17 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Chd3B1AR17 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.28□□□□□ -0.6
Chd3B1AR17 Btrc-209ENSMUST00000224478 2194 ntBASIC11.28□□□□□ -0.6
Chd3B1AR17 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.28□□□□□ -0.6
Chd3B1AR17 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Chd3B1AR17 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC11.28□□□□□ -0.6
Chd3B1AR17 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Chd3B1AR17 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Chd3B1AR17 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.28□□□□□ -0.6
Chd3B1AR17 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.28□□□□□ -0.6
Chd3B1AR17 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.28□□□□□ -0.6
Chd3B1AR17 Gm3318-201ENSMUST00000217604 1183 ntBASIC11.28□□□□□ -0.6
Chd3B1AR17 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chd3B1AR17 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chd3B1AR17 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chd3B1AR17 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chd3B1AR17 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Chd3B1AR17 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chd3B1AR17 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Chd3B1AR17 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chd3B1AR17 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Chd3B1AR17 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Chd3B1AR17 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Chd3B1AR17 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.27□□□□□ -0.61
Chd3B1AR17 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd3B1AR17 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Chd3B1AR17 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd3B1AR17 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chd3B1AR17 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.27□□□□□ -0.61
Chd3B1AR17 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd3B1AR17 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Chd3B1AR17 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd3B1AR17 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Chd3B1AR17 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Chd3B1AR17 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd3B1AR17 Gm1848-201ENSMUST00000120711 789 ntBASIC11.27□□□□□ -0.61
Chd3B1AR17 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd3B1AR17 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chd3B1AR17 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chd3B1AR17 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.27□□□□□ -0.61
Chd3B1AR17 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.27□□□□□ -0.61
Chd3B1AR17 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chd3B1AR17 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd3B1AR17 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Chd3B1AR17 Olfr584-201ENSMUST00000098210 964 ntBASIC11.27□□□□□ -0.61
Chd3B1AR17 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd3B1AR17 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.27□□□□□ -0.61
Chd3B1AR17 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd3B1AR17 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd3B1AR17 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd3B1AR17 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chd3B1AR17 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chd3B1AR17 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd3B1AR17 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd3B1AR17 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.27□□□□□ -0.61
Chd3B1AR17 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chd3B1AR17 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd3B1AR17 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Chd3B1AR17 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd3B1AR17 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chd3B1AR17 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.27□□□□□ -0.61
Chd3B1AR17 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Chd3B1AR17 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Chd3B1AR17 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.26□□□□□ -0.61
Chd3B1AR17 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.26□□□□□ -0.61
Chd3B1AR17 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.26□□□□□ -0.61
Chd3B1AR17 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.26□□□□□ -0.61
Chd3B1AR17 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.26□□□□□ -0.61
Chd3B1AR17 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms