Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Vmn1r44-203ENSMUST00000226120 1772 ntBASIC5.89□□□□□ -1.47
Ubr4A2AN08 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Gm15208-201ENSMUST00000134448 493 ntTSL 3 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Mir6974-201ENSMUST00000184381 83 ntBASIC5.89□□□□□ -1.47
Ubr4A2AN08 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Ngf-204ENSMUST00000198644 1120 ntTSL 5 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Gm18402-201ENSMUST00000203834 586 ntBASIC5.89□□□□□ -1.47
Ubr4A2AN08 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 4930534H03Rik-201ENSMUST00000216311 1669 ntTSL 5 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Gm15586-201ENSMUST00000121218 528 ntBASIC5.89□□□□□ -1.47
Ubr4A2AN08 Gm13631-201ENSMUST00000140978 654 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 A630023P12Rik-203ENSMUST00000141532 638 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Mrip-ps-201ENSMUST00000184613 940 ntBASIC5.89□□□□□ -1.47
Ubr4A2AN08 Gm18349-201ENSMUST00000187440 904 ntBASIC5.89□□□□□ -1.47
Ubr4A2AN08 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Rerg-201ENSMUST00000032347 2075 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Gm42858-201ENSMUST00000202512 1704 ntBASIC5.89□□□□□ -1.47
Ubr4A2AN08 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Gm13347-201ENSMUST00000120298 1353 ntBASIC5.89□□□□□ -1.47
Ubr4A2AN08 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Prpf38a-201ENSMUST00000079213 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Gm13542-201ENSMUST00000118484 637 ntBASIC5.89□□□□□ -1.47
Ubr4A2AN08 Tpsab1-202ENSMUST00000153118 1156 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Gm29471-201ENSMUST00000190527 700 ntBASIC5.89□□□□□ -1.47
Ubr4A2AN08 Ryk-ps1-201ENSMUST00000219713 235 ntBASIC5.89□□□□□ -1.47
Ubr4A2AN08 Gm6129-201ENSMUST00000220725 801 ntBASIC5.89□□□□□ -1.47
Ubr4A2AN08 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 AC154589.2-201ENSMUST00000228847 251 ntBASIC5.89□□□□□ -1.47
Ubr4A2AN08 Ly6g5b-201ENSMUST00000062657 1046 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 AC147366.2-201ENSMUST00000226859 2038 ntBASIC5.89□□□□□ -1.47
Ubr4A2AN08 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Mfap5-207ENSMUST00000148517 1506 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Ubr4A2AN08 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm38227-201ENSMUST00000193036 1602 ntBASIC5.88□□□□□ -1.47
Ubr4A2AN08 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm10176-201ENSMUST00000159707 2264 ntBASIC5.88□□□□□ -1.47
Ubr4A2AN08 Bdh2-202ENSMUST00000120397 1172 ntTSL 5 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Mir6354-201ENSMUST00000184979 116 ntBASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Olfr170-203ENSMUST00000218837 1008 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Olfr170-201ENSMUST00000078603 1008 ntAPPRIS ALT1 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Nrf1-203ENSMUST00000069831 1625 ntTSL 5 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms