Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.67□□□□□ -0.7
Upk1bQ9Z2C6 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Gm12015-201ENSMUST00000117065 843 ntBASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Gm5370-201ENSMUST00000187187 574 ntBASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk1bQ9Z2C6 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Gm22018-201ENSMUST00000104357 131 ntBASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Gm11660-201ENSMUST00000120955 412 ntBASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Upk1bQ9Z2C6 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms