Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Gm23085-201ENSMUST00000157849 293 ntBASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Gm18734-201ENSMUST00000172937 808 ntBASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Gm44008-201ENSMUST00000204345 412 ntBASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Gm6108-201ENSMUST00000208365 367 ntBASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cldn9Q9Z0S7 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Gm24891-201ENSMUST00000104391 136 ntBASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Gm15808-201ENSMUST00000119046 604 ntBASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Gm13263-201ENSMUST00000121271 838 ntBASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Gm17040-202ENSMUST00000170597 889 ntBASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Gm20495-201ENSMUST00000173902 235 ntBASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Gm2260-201ENSMUST00000184965 657 ntBASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Gm4857-201ENSMUST00000192718 785 ntBASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Gm4482-201ENSMUST00000200876 742 ntBASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms