Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Gm24990-201ENSMUST00000157406 323 ntBASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Gm4310-201ENSMUST00000177847 889 ntBASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Gm38117-201ENSMUST00000194653 939 ntBASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
ClcnkaQ9WUB7 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Gm15236-201ENSMUST00000117309 379 ntBASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Gm14028-201ENSMUST00000117434 479 ntBASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Gm12997-201ENSMUST00000120207 640 ntBASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Gm12266-201ENSMUST00000120311 962 ntBASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Gm12196-201ENSMUST00000120954 262 ntBASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Gm11960-201ENSMUST00000122068 925 ntBASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Gm25881-201ENSMUST00000157783 103 ntBASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Gm28450-201ENSMUST00000187349 638 ntBASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Gm6450-201ENSMUST00000200896 574 ntBASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
ClcnkaQ9WUB7 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.65□□□□□ -0.7
ClcnkaQ9WUB7 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms