Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Gm14497-201ENSMUST00000119537 580 ntBASIC13.49□□□□□ -0.25
Scn11aQ9R053 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Gm16305-201ENSMUST00000140747 556 ntBASIC13.49□□□□□ -0.25
Scn11aQ9R053 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Gm42660-201ENSMUST00000197733 947 ntBASIC13.49□□□□□ -0.25
Scn11aQ9R053 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Scn11aQ9R053 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn11aQ9R053 AC142266.1-201ENSMUST00000228107 415 ntBASIC13.49□□□□□ -0.25
Scn11aQ9R053 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Scn11aQ9R053 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Scn11aQ9R053 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.48□□□□□ -0.25
Scn11aQ9R053 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Gm26272-201ENSMUST00000179241 132 ntBASIC13.48□□□□□ -0.25
Scn11aQ9R053 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC13.48□□□□□ -0.25
Scn11aQ9R053 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Gm26670-202ENSMUST00000226862 340 ntBASIC13.48□□□□□ -0.25
Scn11aQ9R053 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.48□□□□□ -0.25
Scn11aQ9R053 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.48□□□□□ -0.25
Scn11aQ9R053 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Gm12129-201ENSMUST00000120104 1147 ntBASIC13.48□□□□□ -0.25
Scn11aQ9R053 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Gm9162-201ENSMUST00000182081 991 ntBASIC13.48□□□□□ -0.25
Scn11aQ9R053 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Rps3a2-201ENSMUST00000074245 792 ntBASIC13.48□□□□□ -0.25
Scn11aQ9R053 Rps3a3-201ENSMUST00000074680 795 ntBASIC13.48□□□□□ -0.25
Scn11aQ9R053 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Scn11aQ9R053 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn11aQ9R053 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Scn11aQ9R053 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn11aQ9R053 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn11aQ9R053 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn11aQ9R053 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn11aQ9R053 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn11aQ9R053 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn11aQ9R053 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn11aQ9R053 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Scn11aQ9R053 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn11aQ9R053 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Scn11aQ9R053 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Scn11aQ9R053 Mir453-201ENSMUST00000104732 82 ntBASIC13.47□□□□□ -0.25
Scn11aQ9R053 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Scn11aQ9R053 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Scn11aQ9R053 Gm15982-201ENSMUST00000121681 554 ntBASIC13.47□□□□□ -0.25
Scn11aQ9R053 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Scn11aQ9R053 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Scn11aQ9R053 Gm31274-201ENSMUST00000197356 229 ntBASIC13.47□□□□□ -0.25
Scn11aQ9R053 Gm6423-201ENSMUST00000204315 934 ntBASIC13.47□□□□□ -0.25
Scn11aQ9R053 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC13.47□□□□□ -0.25
Scn11aQ9R053 AC154435.1-201ENSMUST00000223938 959 ntBASIC13.47□□□□□ -0.25
Scn11aQ9R053 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC13.47□□□□□ -0.25
Scn11aQ9R053 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn11aQ9R053 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn11aQ9R053 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn11aQ9R053 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Scn11aQ9R053 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn11aQ9R053 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn11aQ9R053 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Scn11aQ9R053 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms