Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 AC107453.4-201ENSMUST00000227068 1817 ntBASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Gm14701-201ENSMUST00000117156 348 ntBASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 CT009713.10-202ENSMUST00000225734 696 ntBASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Adamtsl2-201ENSMUST00000091233 3612 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Gm37759-201ENSMUST00000194155 3246 ntBASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Tex21-202ENSMUST00000218426 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Thsd7b-201ENSMUST00000040311 3895 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Gm43823-201ENSMUST00000197391 1808 ntBASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Tyw3-201ENSMUST00000052774 4490 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Lama3-201ENSMUST00000092070 10548 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Enox2-202ENSMUST00000114911 2623 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Smco4Q9JIS3 AC154849.3-201ENSMUST00000223733 1660 ntBASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 AC122197.2-201ENSMUST00000219196 1635 ntBASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Tmem184b-205ENSMUST00000228002 3315 ntBASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Gm42693-201ENSMUST00000196779 631 ntBASIC9.16□□□□□ -0.94
Smco4Q9JIS3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 AC192088.1-201ENSMUST00000227561 301 ntBASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Ppil2-201ENSMUST00000023455 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 4930539E08Rik-201ENSMUST00000062357 4597 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Skiv2l-201ENSMUST00000046022 3951 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Smco4Q9JIS3 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms