Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC15.16■□□□□ 0.02
U2af1Q9D883 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC15.16■□□□□ 0.02
U2af1Q9D883 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC15.16■□□□□ 0.02
U2af1Q9D883 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 Gm43002-201ENSMUST00000200310 155 ntBASIC15.16■□□□□ 0.02
U2af1Q9D883 Gm45550-201ENSMUST00000209380 946 ntBASIC15.16■□□□□ 0.02
U2af1Q9D883 D9Wsu149-201ENSMUST00000214169 594 ntBASIC15.16■□□□□ 0.02
U2af1Q9D883 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC15.16■□□□□ 0.02
U2af1Q9D883 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC15.16■□□□□ 0.02
U2af1Q9D883 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC15.16■□□□□ 0.02
U2af1Q9D883 AC159103.1-201ENSMUST00000228325 429 ntBASIC15.16■□□□□ 0.02
U2af1Q9D883 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC15.16■□□□□ 0.02
U2af1Q9D883 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
U2af1Q9D883 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
U2af1Q9D883 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
U2af1Q9D883 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
U2af1Q9D883 Gm5740-201ENSMUST00000211003 1857 ntBASIC15.16■□□□□ 0.02
U2af1Q9D883 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
U2af1Q9D883 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
U2af1Q9D883 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 AC167022.1-201ENSMUST00000218647 1458 ntBASIC15.15■□□□□ 0.02
U2af1Q9D883 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC15.15■□□□□ 0.02
U2af1Q9D883 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC15.15■□□□□ 0.02
U2af1Q9D883 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC15.15■□□□□ 0.02
U2af1Q9D883 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC15.15■□□□□ 0.02
U2af1Q9D883 Gm44008-201ENSMUST00000204345 412 ntBASIC15.15■□□□□ 0.02
U2af1Q9D883 AC122876.1-201ENSMUST00000217619 825 ntBASIC15.15■□□□□ 0.02
U2af1Q9D883 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC15.15■□□□□ 0.02
U2af1Q9D883 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
U2af1Q9D883 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
U2af1Q9D883 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC15.15■□□□□ 0.02
U2af1Q9D883 Gm18263-201ENSMUST00000220846 1928 ntBASIC15.15■□□□□ 0.02
U2af1Q9D883 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
U2af1Q9D883 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
U2af1Q9D883 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
U2af1Q9D883 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
U2af1Q9D883 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
U2af1Q9D883 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
U2af1Q9D883 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
U2af1Q9D883 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
U2af1Q9D883 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
U2af1Q9D883 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC15.14■□□□□ 0.01
U2af1Q9D883 Gm14942-201ENSMUST00000119642 336 ntBASIC15.14■□□□□ 0.01
U2af1Q9D883 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC15.14■□□□□ 0.01
U2af1Q9D883 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC15.14■□□□□ 0.01
U2af1Q9D883 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC15.14■□□□□ 0.01
U2af1Q9D883 CT485607.1-201ENSMUST00000216100 85 ntBASIC15.14■□□□□ 0.01
U2af1Q9D883 AC154257.1-202ENSMUST00000224729 843 ntBASIC15.14■□□□□ 0.01
U2af1Q9D883 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
U2af1Q9D883 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
U2af1Q9D883 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
U2af1Q9D883 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
U2af1Q9D883 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
U2af1Q9D883 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
U2af1Q9D883 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
U2af1Q9D883 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
U2af1Q9D883 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms