Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trim42Q9D2H5 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim42Q9D2H5 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim42Q9D2H5 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.62□□□□□ -0.55
Trim42Q9D2H5 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim42Q9D2H5 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim42Q9D2H5 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim42Q9D2H5 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trim42Q9D2H5 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trim42Q9D2H5 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim42Q9D2H5 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim42Q9D2H5 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim42Q9D2H5 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim42Q9D2H5 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim42Q9D2H5 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim42Q9D2H5 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.62□□□□□ -0.55
Trim42Q9D2H5 AC115891.3-201ENSMUST00000219161 2472 ntBASIC11.62□□□□□ -0.55
Trim42Q9D2H5 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim42Q9D2H5 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim42Q9D2H5 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim42Q9D2H5 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Gm22993-201ENSMUST00000175423 254 ntBASIC11.61□□□□□ -0.55
Trim42Q9D2H5 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim42Q9D2H5 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Gm28882-201ENSMUST00000185504 314 ntBASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.6□□□□□ -0.55
Trim42Q9D2H5 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim42Q9D2H5 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 104.6 ms