Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Gm14277-201ENSMUST00000121195 360 ntBASIC11.09□□□□□ -0.63
Khdc3Q9CWU5 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.09□□□□□ -0.63
Khdc3Q9CWU5 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Khdc3Q9CWU5 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Khdc3Q9CWU5 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.09□□□□□ -0.63
Khdc3Q9CWU5 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Khdc3Q9CWU5 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Khdc3Q9CWU5 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.09□□□□□ -0.63
Khdc3Q9CWU5 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.09□□□□□ -0.63
Khdc3Q9CWU5 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.09□□□□□ -0.63
Khdc3Q9CWU5 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Khdc3Q9CWU5 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Khdc3Q9CWU5 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Khdc3Q9CWU5 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Khdc3Q9CWU5 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Khdc3Q9CWU5 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Khdc3Q9CWU5 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Khdc3Q9CWU5 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.09□□□□□ -0.63
Khdc3Q9CWU5 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Khdc3Q9CWU5 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.09□□□□□ -0.63
Khdc3Q9CWU5 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.09□□□□□ -0.63
Khdc3Q9CWU5 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Khdc3Q9CWU5 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Khdc3Q9CWU5 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.09□□□□□ -0.63
Khdc3Q9CWU5 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Khdc3Q9CWU5 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Erich3-203ENSMUST00000189969 3460 ntBASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Gm12196-201ENSMUST00000120954 262 ntBASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Gm25881-201ENSMUST00000157783 103 ntBASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Gm43002-201ENSMUST00000200310 155 ntBASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Gm9257-201ENSMUST00000221254 232 ntBASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Khdc3Q9CWU5 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Gm5982-201ENSMUST00000196234 512 ntBASIC11.07□□□□□ -0.64
Khdc3Q9CWU5 Gm7940-201ENSMUST00000218195 769 ntBASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms