Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 AC154352.1-201ENSMUST00000221477 2365 ntBASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Gm12015-201ENSMUST00000117065 843 ntBASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Gm12164-201ENSMUST00000121695 551 ntBASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Gm27501-201ENSMUST00000183599 107 ntBASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Gm18893-201ENSMUST00000198416 943 ntBASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Gm7399-201ENSMUST00000032395 858 ntBASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Gm43636-201ENSMUST00000201501 2235 ntBASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Erich3-203ENSMUST00000189969 3460 ntBASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ska1Q9CPV1 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Gm14644-201ENSMUST00000116671 647 ntBASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Gm11989-201ENSMUST00000117240 672 ntBASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Gm11362-201ENSMUST00000118838 850 ntBASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Gm19187-201ENSMUST00000206781 892 ntBASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Gm8712-201ENSMUST00000221090 701 ntBASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Gm5403-201ENSMUST00000117105 2795 ntBASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Ska1Q9CPV1 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms