Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Gm12380-201ENSMUST00000119012 544 ntBASIC11.31□□□□□ -0.6
Trim16Q99PP9 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Gm29199-201ENSMUST00000187766 775 ntBASIC11.31□□□□□ -0.6
Trim16Q99PP9 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.31□□□□□ -0.6
Trim16Q99PP9 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.31□□□□□ -0.6
Trim16Q99PP9 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Gm8956-201ENSMUST00000203939 825 ntBASIC11.31□□□□□ -0.6
Trim16Q99PP9 Gm17827-201ENSMUST00000211825 742 ntBASIC11.31□□□□□ -0.6
Trim16Q99PP9 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.31□□□□□ -0.6
Trim16Q99PP9 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.31□□□□□ -0.6
Trim16Q99PP9 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trim16Q99PP9 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.3□□□□□ -0.6
Trim16Q99PP9 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.3□□□□□ -0.6
Trim16Q99PP9 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trim16Q99PP9 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.3□□□□□ -0.6
Trim16Q99PP9 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Gm11439-201ENSMUST00000118598 409 ntBASIC11.3□□□□□ -0.6
Trim16Q99PP9 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.3□□□□□ -0.6
Trim16Q99PP9 Gm12997-201ENSMUST00000120207 640 ntBASIC11.3□□□□□ -0.6
Trim16Q99PP9 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim16Q99PP9 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.3□□□□□ -0.6
Trim16Q99PP9 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.3□□□□□ -0.6
Trim16Q99PP9 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.3□□□□□ -0.6
Trim16Q99PP9 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.3□□□□□ -0.6
Trim16Q99PP9 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trim16Q99PP9 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.3□□□□□ -0.6
Trim16Q99PP9 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trim16Q99PP9 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.3□□□□□ -0.6
Trim16Q99PP9 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.29□□□□□ -0.6
Trim16Q99PP9 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trim16Q99PP9 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.29□□□□□ -0.6
Trim16Q99PP9 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trim16Q99PP9 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms