Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Clp1Q99LI9 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.21□□□□□ -0.46
Clp1Q99LI9 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clp1Q99LI9 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.21□□□□□ -0.46
Clp1Q99LI9 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clp1Q99LI9 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Clp1Q99LI9 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clp1Q99LI9 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clp1Q99LI9 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.21□□□□□ -0.46
Clp1Q99LI9 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clp1Q99LI9 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clp1Q99LI9 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clp1Q99LI9 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Gm23612-201ENSMUST00000103823 110 ntBASIC12.2□□□□□ -0.46
Clp1Q99LI9 Gm25148-201ENSMUST00000104611 123 ntBASIC12.2□□□□□ -0.46
Clp1Q99LI9 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Gm12389-201ENSMUST00000117696 418 ntBASIC12.2□□□□□ -0.46
Clp1Q99LI9 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Gm23576-201ENSMUST00000179918 110 ntBASIC12.2□□□□□ -0.46
Clp1Q99LI9 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC12.2□□□□□ -0.46
Clp1Q99LI9 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.2□□□□□ -0.46
Clp1Q99LI9 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.2□□□□□ -0.46
Clp1Q99LI9 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Gm8255-201ENSMUST00000218693 305 ntBASIC12.2□□□□□ -0.46
Clp1Q99LI9 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clp1Q99LI9 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.2□□□□□ -0.46
Clp1Q99LI9 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.2□□□□□ -0.46
Clp1Q99LI9 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clp1Q99LI9 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Clp1Q99LI9 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.19□□□□□ -0.46
Clp1Q99LI9 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Gm25562-201ENSMUST00000104608 133 ntBASIC12.19□□□□□ -0.46
Clp1Q99LI9 Gm11957-201ENSMUST00000118304 779 ntBASIC12.19□□□□□ -0.46
Clp1Q99LI9 Gm15196-201ENSMUST00000121406 482 ntBASIC12.19□□□□□ -0.46
Clp1Q99LI9 Gm14165-201ENSMUST00000121456 952 ntBASIC12.19□□□□□ -0.46
Clp1Q99LI9 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.19□□□□□ -0.46
Clp1Q99LI9 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clp1Q99LI9 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Gm18351-201ENSMUST00000188646 883 ntBASIC12.19□□□□□ -0.46
Clp1Q99LI9 Gm43610-201ENSMUST00000199117 365 ntBASIC12.19□□□□□ -0.46
Clp1Q99LI9 Gm45085-201ENSMUST00000209100 441 ntBASIC12.19□□□□□ -0.46
Clp1Q99LI9 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Clp1Q99LI9 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.19□□□□□ -0.46
Clp1Q99LI9 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Gm8894-201ENSMUST00000074642 666 ntBASIC12.19□□□□□ -0.46
Clp1Q99LI9 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clp1Q99LI9 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clp1Q99LI9 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms