Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Smarcd2Q99JR8 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Gm25830-201ENSMUST00000158923 132 ntBASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Gm18201-201ENSMUST00000174735 875 ntBASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Gm44323-201ENSMUST00000198689 129 ntBASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Gm5599-201ENSMUST00000209602 788 ntBASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Smarcd2Q99JR8 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smarcd2Q99JR8 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Smarcd2Q99JR8 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Smarcd2Q99JR8 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smarcd2Q99JR8 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.65□□□□□ -0.55
Smarcd2Q99JR8 Paupar-201ENSMUST00000194826 3482 ntBASIC11.65□□□□□ -0.55
Smarcd2Q99JR8 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smarcd2Q99JR8 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Smarcd2Q99JR8 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 Gm15003-201ENSMUST00000118884 446 ntBASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 Gm22846-201ENSMUST00000157706 270 ntBASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 Gm7902-201ENSMUST00000198842 947 ntBASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 Gm44008-201ENSMUST00000204345 412 ntBASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 AC158392.3-201ENSMUST00000224271 1284 ntBASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Smarcd2Q99JR8 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms