Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Gm12579-201ENSMUST00000118040 783 ntBASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Gm15207-201ENSMUST00000119259 442 ntBASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Gm12208-201ENSMUST00000122004 163 ntBASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Gm14665-201ENSMUST00000122294 557 ntBASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Gm44545-201ENSMUST00000208262 746 ntBASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.3□□□□□ -0.28
Ddx41Q91VN6 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ddx41Q91VN6 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Gm13615-201ENSMUST00000120242 1612 ntBASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Gm15566-201ENSMUST00000121130 590 ntBASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Gm14460-201ENSMUST00000121511 639 ntBASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Gm5714-201ENSMUST00000197343 566 ntBASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Gm19287-201ENSMUST00000203190 358 ntBASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Gm45398-201ENSMUST00000210561 165 ntBASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ddx41Q91VN6 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 AC154314.2-201ENSMUST00000223677 3502 ntBASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ddx41Q91VN6 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms