Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.81□□□□□ -0.36
Ddx39aQ8VDW0 Gm5468-202ENSMUST00000227851 682 ntBASIC12.81□□□□□ -0.36
Ddx39aQ8VDW0 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx39aQ8VDW0 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx39aQ8VDW0 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ddx39aQ8VDW0 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ddx39aQ8VDW0 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx39aQ8VDW0 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx39aQ8VDW0 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx39aQ8VDW0 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.81□□□□□ -0.36
Ddx39aQ8VDW0 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx39aQ8VDW0 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx39aQ8VDW0 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx39aQ8VDW0 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx39aQ8VDW0 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.81□□□□□ -0.36
Ddx39aQ8VDW0 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx39aQ8VDW0 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ddx39aQ8VDW0 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Gm11675-201ENSMUST00000121873 832 ntBASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Gm5100-201ENSMUST00000195631 589 ntBASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Gm18561-201ENSMUST00000206027 804 ntBASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Gm6722-201ENSMUST00000221586 390 ntBASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ddx39aQ8VDW0 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Gm25063-201ENSMUST00000104666 94 ntBASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Gm11628-201ENSMUST00000117568 171 ntBASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Gm11500-201ENSMUST00000118237 601 ntBASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Mir6407-201ENSMUST00000184510 101 ntBASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Gm18065-201ENSMUST00000221395 526 ntBASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ddx39aQ8VDW0 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms