Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Gm8752-201ENSMUST00000173427 1694 ntBASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC9.39□□□□□ -0.91
Nup35Q8R4R6 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 AC154171.2-201ENSMUST00000225219 2652 ntBASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 AC122273.1-201ENSMUST00000213634 2327 ntBASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Gm8131-201ENSMUST00000213783 1570 ntBASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Gm17244-201ENSMUST00000192482 3416 ntBASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Gm11660-201ENSMUST00000120955 412 ntBASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Gm8835-201ENSMUST00000173096 1169 ntBASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Gm8565-201ENSMUST00000183259 1014 ntBASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Gm5370-201ENSMUST00000187187 574 ntBASIC9.38□□□□□ -0.91
Nup35Q8R4R6 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Igkv2-116-201ENSMUST00000199327 362 ntBASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Gm6013-201ENSMUST00000212264 699 ntBASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Gm2553-201ENSMUST00000215986 605 ntBASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Gm7293-201ENSMUST00000216682 1007 ntBASIC9.38□□□□□ -0.91
Nup35Q8R4R6 AC153954.1-201ENSMUST00000216959 255 ntBASIC9.38□□□□□ -0.91
Nup35Q8R4R6 AC102569.1-201ENSMUST00000221563 685 ntBASIC9.38□□□□□ -0.91
Nup35Q8R4R6 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.38□□□□□ -0.91
Nup35Q8R4R6 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Gm10699-201ENSMUST00000098916 2130 ntBASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Gm1840-201ENSMUST00000051687 1432 ntBASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Gm44663-201ENSMUST00000206898 3150 ntBASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Nup35Q8R4R6 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nup35Q8R4R6 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Nup35Q8R4R6 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nup35Q8R4R6 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Nup35Q8R4R6 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nup35Q8R4R6 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nup35Q8R4R6 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nup35Q8R4R6 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nup35Q8R4R6 AC114008.2-201ENSMUST00000227699 1347 ntBASIC9.37□□□□□ -0.91
Nup35Q8R4R6 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Nup35Q8R4R6 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nup35Q8R4R6 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nup35Q8R4R6 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nup35Q8R4R6 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.37□□□□□ -0.91
Nup35Q8R4R6 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC9.37□□□□□ -0.91
Nup35Q8R4R6 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Nup35Q8R4R6 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms