Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx54Q8K4L0 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx54Q8K4L0 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ddx54Q8K4L0 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx54Q8K4L0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ddx54Q8K4L0 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC15.07■□□□□ 0
Ddx54Q8K4L0 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx54Q8K4L0 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC15.07■□□□□ 0
Ddx54Q8K4L0 Gm6758-201ENSMUST00000119643 1055 ntBASIC15.07■□□□□ 0
Ddx54Q8K4L0 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ddx54Q8K4L0 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC15.07■□□□□ 0
Ddx54Q8K4L0 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC15.07■□□□□ 0
Ddx54Q8K4L0 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC15.07■□□□□ 0
Ddx54Q8K4L0 Gm19013-201ENSMUST00000183895 1222 ntBASIC15.07■□□□□ 0
Ddx54Q8K4L0 Gm19014-201ENSMUST00000184828 1189 ntBASIC15.07■□□□□ 0
Ddx54Q8K4L0 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC15.07■□□□□ 0
Ddx54Q8K4L0 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ddx54Q8K4L0 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx54Q8K4L0 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx54Q8K4L0 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ddx54Q8K4L0 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ddx54Q8K4L0 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC15.07■□□□□ 0
Ddx54Q8K4L0 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ddx54Q8K4L0 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx54Q8K4L0 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ddx54Q8K4L0 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ddx54Q8K4L0 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Gm44740-201ENSMUST00000205603 1614 ntBASIC15.06■□□□□ 0
Ddx54Q8K4L0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.06■□□□□ 0
Ddx54Q8K4L0 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Gm25394-201ENSMUST00000157338 133 ntBASIC15.06■□□□□ 0
Ddx54Q8K4L0 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Gm19087-201ENSMUST00000191430 946 ntBASIC15.06■□□□□ 0
Ddx54Q8K4L0 Ighv5-8-202ENSMUST00000191967 337 ntBASIC15.06■□□□□ 0
Ddx54Q8K4L0 Gm43726-201ENSMUST00000199110 775 ntBASIC15.06■□□□□ 0
Ddx54Q8K4L0 Wbp1-209ENSMUST00000205023 716 ntBASIC15.06■□□□□ 0
Ddx54Q8K4L0 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx54Q8K4L0 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ddx54Q8K4L0 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Ddx54Q8K4L0 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Ddx54Q8K4L0 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ddx54Q8K4L0 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ddx54Q8K4L0 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
Ddx54Q8K4L0 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx54Q8K4L0 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Ddx54Q8K4L0 Gm23439-201ENSMUST00000104292 132 ntBASIC15.05■□□□□ -0
Ddx54Q8K4L0 Gm25148-201ENSMUST00000104611 123 ntBASIC15.05■□□□□ -0
Ddx54Q8K4L0 Gm12009-201ENSMUST00000121361 1100 ntBASIC15.05■□□□□ -0
Ddx54Q8K4L0 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx54Q8K4L0 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx54Q8K4L0 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC15.05■□□□□ -0
Ddx54Q8K4L0 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC15.05■□□□□ -0
Ddx54Q8K4L0 Gm8226-201ENSMUST00000190511 798 ntBASIC15.05■□□□□ -0
Ddx54Q8K4L0 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC15.05■□□□□ -0
Ddx54Q8K4L0 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Ddx54Q8K4L0 AC154477.1-201ENSMUST00000226515 773 ntBASIC15.05■□□□□ -0
Ddx54Q8K4L0 AC137842.2-201ENSMUST00000227734 797 ntBASIC15.05■□□□□ -0
Ddx54Q8K4L0 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx54Q8K4L0 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx54Q8K4L0 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ddx54Q8K4L0 Gm6304-201ENSMUST00000096579 447 ntBASIC15.05■□□□□ -0
Ddx54Q8K4L0 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ddx54Q8K4L0 Gm5308-201ENSMUST00000196752 1354 ntBASIC15.05■□□□□ -0
Ddx54Q8K4L0 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx54Q8K4L0 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC15.05■□□□□ -0
Ddx54Q8K4L0 Gm38192-201ENSMUST00000194364 1847 ntBASIC15.05■□□□□ -0
Ddx54Q8K4L0 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx54Q8K4L0 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC15.05■□□□□ -0
Ddx54Q8K4L0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ddx54Q8K4L0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx54Q8K4L0 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx54Q8K4L0 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms