Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Gm10268-201ENSMUST00000085340 555 ntBASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ebf4Q8K4J2 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Gm11918-201ENSMUST00000121660 179 ntBASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Gm6222-202ENSMUST00000182143 629 ntBASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Gm5370-201ENSMUST00000187187 574 ntBASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Gm43438-201ENSMUST00000198133 379 ntBASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Gm43966-201ENSMUST00000203301 612 ntBASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.47□□□□□ -0.73
Ebf4Q8K4J2 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Gm11478-201ENSMUST00000117851 599 ntBASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Gm7809-201ENSMUST00000153199 742 ntBASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Gm6244-201ENSMUST00000178732 841 ntBASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Ighv5-13-201ENSMUST00000193550 290 ntBASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Gm42627-201ENSMUST00000197347 224 ntBASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms