Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rfwd3Q8CIK8 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Gm13461-201ENSMUST00000120980 662 ntBASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Gm13263-201ENSMUST00000121271 838 ntBASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Gm11960-201ENSMUST00000122068 925 ntBASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Gm7940-201ENSMUST00000218195 769 ntBASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rfwd3Q8CIK8 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Gm11700-201ENSMUST00000119409 403 ntBASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Gm6506-201ENSMUST00000119775 1136 ntBASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Mir8093-201ENSMUST00000185043 137 ntBASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms