Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CopaQ8CIE6 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CopaQ8CIE6 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.82□□□□□ -0.52
CopaQ8CIE6 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Gm24891-201ENSMUST00000104391 136 ntBASIC11.82□□□□□ -0.52
CopaQ8CIE6 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Gm8199-201ENSMUST00000121323 823 ntBASIC11.82□□□□□ -0.52
CopaQ8CIE6 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Gm2965-201ENSMUST00000198365 343 ntBASIC11.82□□□□□ -0.52
CopaQ8CIE6 Gm8956-201ENSMUST00000203939 825 ntBASIC11.82□□□□□ -0.52
CopaQ8CIE6 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Ginm1-202ENSMUST00000065124 300 ntBASIC11.82□□□□□ -0.52
CopaQ8CIE6 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.82□□□□□ -0.52
CopaQ8CIE6 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.82□□□□□ -0.52
CopaQ8CIE6 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CopaQ8CIE6 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopaQ8CIE6 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopaQ8CIE6 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.81□□□□□ -0.52
CopaQ8CIE6 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopaQ8CIE6 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CopaQ8CIE6 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.81□□□□□ -0.52
CopaQ8CIE6 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Gm5419-201ENSMUST00000119301 527 ntBASIC11.81□□□□□ -0.52
CopaQ8CIE6 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopaQ8CIE6 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.81□□□□□ -0.52
CopaQ8CIE6 Gm5051-201ENSMUST00000204085 485 ntBASIC11.81□□□□□ -0.52
CopaQ8CIE6 Gm9797-202ENSMUST00000218003 294 ntBASIC11.81□□□□□ -0.52
CopaQ8CIE6 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.81□□□□□ -0.52
CopaQ8CIE6 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.81□□□□□ -0.52
CopaQ8CIE6 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.81□□□□□ -0.52
CopaQ8CIE6 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Gm5705-201ENSMUST00000066241 711 ntBASIC11.81□□□□□ -0.52
CopaQ8CIE6 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CopaQ8CIE6 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.81□□□□□ -0.52
CopaQ8CIE6 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopaQ8CIE6 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CopaQ8CIE6 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms