Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Gm14219-201ENSMUST00000120414 288 ntBASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Gm12407-201ENSMUST00000180219 324 ntBASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Gm38117-201ENSMUST00000194653 939 ntBASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Gm44506-201ENSMUST00000206278 965 ntBASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Gm18059-201ENSMUST00000208073 580 ntBASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc17Q8CE13 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Gm12990-201ENSMUST00000120372 468 ntBASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Gm15610-201ENSMUST00000120584 195 ntBASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Gm37458-201ENSMUST00000194055 410 ntBASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Gm44158-201ENSMUST00000203881 505 ntBASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.05□□□□□ -0.48
Ccdc17Q8CE13 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Gm7150-201ENSMUST00000122032 981 ntBASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Gm3150-201ENSMUST00000166418 204 ntBASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Gm5100-201ENSMUST00000195631 589 ntBASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.04□□□□□ -0.48
Ccdc17Q8CE13 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms