Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Gm12247-201ENSMUST00000117585 670 ntBASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Gm11451-201ENSMUST00000118946 630 ntBASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Gm27438-201ENSMUST00000183480 110 ntBASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Gm17877-201ENSMUST00000192578 814 ntBASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Gm37299-201ENSMUST00000193951 826 ntBASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdh19Q80TF3 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Gm22138-201ENSMUST00000158748 128 ntBASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Gm18367-201ENSMUST00000176139 600 ntBASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Gm44315-201ENSMUST00000203041 219 ntBASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Gm8574-201ENSMUST00000203207 924 ntBASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Gm2875-201ENSMUST00000211333 360 ntBASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Gm5451-201ENSMUST00000080545 579 ntBASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Snora73b-201ENSMUST00000083419 205 ntBASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdh19Q80TF3 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh19Q80TF3 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms