Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Gm4726-201ENSMUST00000135604 736 ntBASIC10.92□□□□□ -0.66
Tnfaip3Q60769 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfaip3Q60769 Gm6019-201ENSMUST00000148369 736 ntBASIC10.92□□□□□ -0.66
Tnfaip3Q60769 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfaip3Q60769 Gm24844-201ENSMUST00000158679 127 ntBASIC10.92□□□□□ -0.66
Tnfaip3Q60769 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC10.92□□□□□ -0.66
Tnfaip3Q60769 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.92□□□□□ -0.66
Tnfaip3Q60769 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.92□□□□□ -0.66
Tnfaip3Q60769 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC10.92□□□□□ -0.66
Tnfaip3Q60769 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC10.92□□□□□ -0.66
Tnfaip3Q60769 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.92□□□□□ -0.66
Tnfaip3Q60769 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfaip3Q60769 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Tnfaip3Q60769 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfaip3Q60769 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.92□□□□□ -0.66
Tnfaip3Q60769 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfaip3Q60769 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfaip3Q60769 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfaip3Q60769 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfaip3Q60769 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Tnfaip3Q60769 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfaip3Q60769 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Gm22711-201ENSMUST00000116890 133 ntBASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Gm23045-201ENSMUST00000175041 96 ntBASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Gm43852-201ENSMUST00000202098 917 ntBASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 AC154849.4-201ENSMUST00000224868 365 ntBASIC10.91□□□□□ -0.66
Tnfaip3Q60769 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfaip3Q60769 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Gm7150-201ENSMUST00000122032 981 ntBASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Gm8459-201ENSMUST00000162504 760 ntBASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Gm38314-201ENSMUST00000195709 625 ntBASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Gm9132-201ENSMUST00000210182 832 ntBASIC10.9□□□□□ -0.66
Tnfaip3Q60769 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms