Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Gm13461-201ENSMUST00000120980 662 ntBASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Gm28450-201ENSMUST00000187349 638 ntBASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 AU022133-201ENSMUST00000200601 873 ntBASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Mir433-201ENSMUST00000093564 124 ntBASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 AC154849.3-201ENSMUST00000223733 1660 ntBASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rnf20Q5DTM8 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Gm15515-201ENSMUST00000117827 822 ntBASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Gm8199-201ENSMUST00000121323 823 ntBASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Gm27552-201ENSMUST00000183351 62 ntBASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Gm27844-201ENSMUST00000183613 62 ntBASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Gm29164-201ENSMUST00000185454 1024 ntBASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Gm44008-201ENSMUST00000204345 412 ntBASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Gm42463-201ENSMUST00000198041 4886 ntBASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rnf20Q5DTM8 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rnf20Q5DTM8 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms