Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Gm8899-201ENSMUST00000214635 1332 ntBASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Gm11619-201ENSMUST00000117474 237 ntBASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Gm11578-201ENSMUST00000118530 459 ntBASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Gm14213-201ENSMUST00000119778 768 ntBASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Gm12274-201ENSMUST00000120062 385 ntBASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Map1b-203ENSMUST00000223725 2669 ntBASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ddx49Q4FZF3 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Gm21759-201ENSMUST00000178345 1828 ntBASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 AC158636.1-201ENSMUST00000220118 1393 ntBASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Gm25053-201ENSMUST00000103982 133 ntBASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Gm25922-201ENSMUST00000104281 130 ntBASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Gm13019-201ENSMUST00000120000 276 ntBASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Gm26047-201ENSMUST00000157308 113 ntBASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Gm24679-201ENSMUST00000158762 111 ntBASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Gm17192-201ENSMUST00000169031 511 ntBASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Gm26047-202ENSMUST00000198840 115 ntBASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Gm25053-202ENSMUST00000199731 132 ntBASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Gm45856-201ENSMUST00000212752 416 ntBASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 AC164618.2-201ENSMUST00000224770 573 ntBASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ddx49Q4FZF3 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms