Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp48Q3V0C5 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp48Q3V0C5 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp48Q3V0C5 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Usp48Q3V0C5 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp48Q3V0C5 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 AC166836.1-201ENSMUST00000219933 1795 ntBASIC14.34□□□□□ -0.11
Usp48Q3V0C5 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 CT009489.1-201ENSMUST00000227740 1893 ntBASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Gm25766-201ENSMUST00000104101 131 ntBASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Gm43727-201ENSMUST00000198021 2647 ntBASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.34□□□□□ -0.11
Usp48Q3V0C5 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Usp48Q3V0C5 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp48Q3V0C5 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
Usp48Q3V0C5 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp48Q3V0C5 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Usp48Q3V0C5 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp48Q3V0C5 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Usp48Q3V0C5 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Gm15004-201ENSMUST00000119192 630 ntBASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Gm12036-201ENSMUST00000120008 530 ntBASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Gm8723-201ENSMUST00000166076 820 ntBASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Gm8701-201ENSMUST00000169259 874 ntBASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Gm8451-201ENSMUST00000170338 447 ntBASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Gm4310-201ENSMUST00000177847 889 ntBASIC14.33□□□□□ -0.12
Usp48Q3V0C5 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Gm43752-201ENSMUST00000198475 697 ntBASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Gm7536-201ENSMUST00000077389 444 ntBASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Gm5453-201ENSMUST00000080866 447 ntBASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp48Q3V0C5 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Gm44056-201ENSMUST00000204623 1427 ntBASIC14.32□□□□□ -0.12
Usp48Q3V0C5 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Gm6211-201ENSMUST00000147973 4275 ntBASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp48Q3V0C5 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Gm14807-201ENSMUST00000116640 983 ntBASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Gm12856-201ENSMUST00000119471 1293 ntBASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Gm5909-201ENSMUST00000119768 1281 ntBASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Gm4034-201ENSMUST00000187674 480 ntBASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Gm45758-201ENSMUST00000212448 1006 ntBASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp48Q3V0C5 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms