Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Gm23908-201ENSMUST00000104599 132 ntBASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Gm6881-201ENSMUST00000121811 833 ntBASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Gm7565-201ENSMUST00000203611 623 ntBASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Olfr403-201ENSMUST00000076675 942 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Olfr43-201ENSMUST00000078936 1092 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Gm26035-201ENSMUST00000083065 308 ntBASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Gm25580-201ENSMUST00000083409 327 ntBASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Spg11Q3UHA3 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Gm10729-202ENSMUST00000193403 1375 ntBASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Gm14153-201ENSMUST00000119923 1139 ntBASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Rce1-203ENSMUST00000224707 1255 ntBASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Gm15720-201ENSMUST00000117133 282 ntBASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Gm12499-201ENSMUST00000121961 546 ntBASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Gm4034-201ENSMUST00000187674 480 ntBASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Gm8525-201ENSMUST00000189674 861 ntBASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Spg11Q3UHA3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Gm8754-201ENSMUST00000118391 520 ntBASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Gm17147-201ENSMUST00000164176 432 ntBASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Zkscan7-205ENSMUST00000216462 990 ntBASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC10.57□□□□□ -0.72
Spg11Q3UHA3 CT030195.2-201ENSMUST00000226074 1286 ntBASIC10.57□□□□□ -0.72
Spg11Q3UHA3 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms