Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.24□□□□□ -0.45
Trim43aQ3TL54 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim43aQ3TL54 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Gm11500-201ENSMUST00000118237 601 ntBASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Gm15547-201ENSMUST00000122152 333 ntBASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Gm3329-201ENSMUST00000159873 556 ntBASIC12.22□□□□□ -0.45
Trim43aQ3TL54 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Gm5455-201ENSMUST00000058710 715 ntBASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim43aQ3TL54 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms