Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.74□□□□□ -0.53
Ebf1Q07802 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.74□□□□□ -0.53
Ebf1Q07802 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC11.74□□□□□ -0.53
Ebf1Q07802 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ebf1Q07802 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Ebf1Q07802 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC11.74□□□□□ -0.53
Ebf1Q07802 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ebf1Q07802 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Gm5100-201ENSMUST00000195631 589 ntBASIC11.74□□□□□ -0.53
Ebf1Q07802 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC11.74□□□□□ -0.53
Ebf1Q07802 Gm35960-201ENSMUST00000202712 767 ntBASIC11.74□□□□□ -0.53
Ebf1Q07802 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.74□□□□□ -0.53
Ebf1Q07802 Gm45120-201ENSMUST00000208880 408 ntBASIC11.74□□□□□ -0.53
Ebf1Q07802 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.74□□□□□ -0.53
Ebf1Q07802 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.74□□□□□ -0.53
Ebf1Q07802 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Ebf1Q07802 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ebf1Q07802 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.74□□□□□ -0.53
Ebf1Q07802 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.74□□□□□ -0.53
Ebf1Q07802 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Ebf1Q07802 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ebf1Q07802 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Ebf1Q07802 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Ebf1Q07802 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ebf1Q07802 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Ebf1Q07802 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.73□□□□□ -0.53
Ebf1Q07802 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.73□□□□□ -0.53
Ebf1Q07802 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ebf1Q07802 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ebf1Q07802 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.73□□□□□ -0.53
Ebf1Q07802 Gm7150-201ENSMUST00000122032 981 ntBASIC11.73□□□□□ -0.53
Ebf1Q07802 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.73□□□□□ -0.53
Ebf1Q07802 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.73□□□□□ -0.53
Ebf1Q07802 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.73□□□□□ -0.53
Ebf1Q07802 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC11.73□□□□□ -0.53
Ebf1Q07802 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 Gm26134-201ENSMUST00000178484 110 ntBASIC11.73□□□□□ -0.53
Ebf1Q07802 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 Gm17889-201ENSMUST00000198410 598 ntBASIC11.73□□□□□ -0.53
Ebf1Q07802 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Ebf1Q07802 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.73□□□□□ -0.53
Ebf1Q07802 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.73□□□□□ -0.53
Ebf1Q07802 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.73□□□□□ -0.53
Ebf1Q07802 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 AC154176.1-201ENSMUST00000225897 220 ntBASIC11.73□□□□□ -0.53
Ebf1Q07802 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.73□□□□□ -0.53
Ebf1Q07802 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ebf1Q07802 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.73□□□□□ -0.53
Ebf1Q07802 Gm5451-201ENSMUST00000080545 579 ntBASIC11.73□□□□□ -0.53
Ebf1Q07802 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Ebf1Q07802 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ebf1Q07802 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf1Q07802 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf1Q07802 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf1Q07802 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf1Q07802 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ebf1Q07802 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf1Q07802 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Ebf1Q07802 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.72□□□□□ -0.53
Ebf1Q07802 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.72□□□□□ -0.53
Ebf1Q07802 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf1Q07802 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf1Q07802 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.72□□□□□ -0.53
Ebf1Q07802 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf1Q07802 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf1Q07802 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf1Q07802 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf1Q07802 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms