Protein–RNA interactions for Protein: Q00623

Apoa1, Apolipoprotein A-I, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa1Q00623 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.91□□□□□ -0.66
Apoa1Q00623 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Apoa1Q00623 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Apoa1Q00623 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.91□□□□□ -0.66
Apoa1Q00623 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Apoa1Q00623 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.91□□□□□ -0.66
Apoa1Q00623 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Apoa1Q00623 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Gm11424-201ENSMUST00000121929 829 ntBASIC10.91□□□□□ -0.66
Apoa1Q00623 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.91□□□□□ -0.66
Apoa1Q00623 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Apoa1Q00623 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.91□□□□□ -0.66
Apoa1Q00623 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.91□□□□□ -0.66
Apoa1Q00623 Gm3096-201ENSMUST00000185770 364 ntBASIC10.91□□□□□ -0.66
Apoa1Q00623 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.91□□□□□ -0.66
Apoa1Q00623 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.91□□□□□ -0.66
Apoa1Q00623 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.91□□□□□ -0.66
Apoa1Q00623 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.91□□□□□ -0.66
Apoa1Q00623 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.91□□□□□ -0.66
Apoa1Q00623 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Apoa1Q00623 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Apoa1Q00623 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.91□□□□□ -0.66
Apoa1Q00623 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.91□□□□□ -0.66
Apoa1Q00623 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Apoa1Q00623 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Apoa1Q00623 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Apoa1Q00623 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.91□□□□□ -0.66
Apoa1Q00623 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Apoa1Q00623 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Apoa1Q00623 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Apoa1Q00623 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Apoa1Q00623 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Apoa1Q00623 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Apoa1Q00623 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Apoa1Q00623 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Apoa1Q00623 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Apoa1Q00623 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Apoa1Q00623 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Apoa1Q00623 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.9□□□□□ -0.66
Apoa1Q00623 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.9□□□□□ -0.66
Apoa1Q00623 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Apoa1Q00623 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Apoa1Q00623 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Apoa1Q00623 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Apoa1Q00623 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Apoa1Q00623 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Apoa1Q00623 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Apoa1Q00623 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.9□□□□□ -0.66
Apoa1Q00623 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Apoa1Q00623 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Apoa1Q00623 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Apoa1Q00623 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Apoa1Q00623 Gm13829-201ENSMUST00000119600 138 ntBASIC10.9□□□□□ -0.66
Apoa1Q00623 Gm11425-201ENSMUST00000119608 498 ntBASIC10.9□□□□□ -0.66
Apoa1Q00623 Gm11660-201ENSMUST00000120955 412 ntBASIC10.9□□□□□ -0.66
Apoa1Q00623 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Apoa1Q00623 Gm6963-201ENSMUST00000147879 379 ntBASIC10.9□□□□□ -0.66
Apoa1Q00623 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.9□□□□□ -0.66
Apoa1Q00623 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Apoa1Q00623 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.9□□□□□ -0.66
Apoa1Q00623 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.9□□□□□ -0.66
Apoa1Q00623 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.9□□□□□ -0.66
Apoa1Q00623 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.9□□□□□ -0.66
Apoa1Q00623 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.9□□□□□ -0.66
Apoa1Q00623 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Apoa1Q00623 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.9□□□□□ -0.66
Apoa1Q00623 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.9□□□□□ -0.66
Apoa1Q00623 Gm30285-201ENSMUST00000214614 422 ntBASIC10.9□□□□□ -0.66
Apoa1Q00623 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Apoa1Q00623 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Apoa1Q00623 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Apoa1Q00623 Gm9396-201ENSMUST00000076703 567 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms