Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.96□□□□□ -0.65
Nkx3-2P97503 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.96□□□□□ -0.65
Nkx3-2P97503 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Gm12579-201ENSMUST00000118040 783 ntBASIC10.96□□□□□ -0.65
Nkx3-2P97503 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Gm14585-201ENSMUST00000120713 634 ntBASIC10.96□□□□□ -0.65
Nkx3-2P97503 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.96□□□□□ -0.65
Nkx3-2P97503 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Gm23045-201ENSMUST00000175041 96 ntBASIC10.96□□□□□ -0.65
Nkx3-2P97503 Gm21092-201ENSMUST00000178995 955 ntBASIC10.96□□□□□ -0.65
Nkx3-2P97503 Gm6114-201ENSMUST00000182472 968 ntBASIC10.96□□□□□ -0.65
Nkx3-2P97503 Gm19891-201ENSMUST00000189771 303 ntBASIC10.96□□□□□ -0.65
Nkx3-2P97503 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Gm8285-201ENSMUST00000208293 759 ntBASIC10.96□□□□□ -0.65
Nkx3-2P97503 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.96□□□□□ -0.65
Nkx3-2P97503 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.96□□□□□ -0.65
Nkx3-2P97503 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.96□□□□□ -0.65
Nkx3-2P97503 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx3-2P97503 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Nkx3-2P97503 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.66
Nkx3-2P97503 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx3-2P97503 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx3-2P97503 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx3-2P97503 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx3-2P97503 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx3-2P97503 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx3-2P97503 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Nkx3-2P97503 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Nkx3-2P97503 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx3-2P97503 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Nkx3-2P97503 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.95□□□□□ -0.66
Nkx3-2P97503 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC10.95□□□□□ -0.66
Nkx3-2P97503 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Gm14460-201ENSMUST00000121511 639 ntBASIC10.95□□□□□ -0.66
Nkx3-2P97503 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Gm26047-201ENSMUST00000157308 113 ntBASIC10.95□□□□□ -0.66
Nkx3-2P97503 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Gm19459-201ENSMUST00000176240 835 ntBASIC10.95□□□□□ -0.66
Nkx3-2P97503 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.95□□□□□ -0.66
Nkx3-2P97503 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Gm26047-202ENSMUST00000198840 115 ntBASIC10.95□□□□□ -0.66
Nkx3-2P97503 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Gm44506-201ENSMUST00000206278 965 ntBASIC10.95□□□□□ -0.66
Nkx3-2P97503 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC10.95□□□□□ -0.66
Nkx3-2P97503 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.95□□□□□ -0.66
Nkx3-2P97503 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 AC159103.1-201ENSMUST00000228325 429 ntBASIC10.95□□□□□ -0.66
Nkx3-2P97503 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.95□□□□□ -0.66
Nkx3-2P97503 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nkx3-2P97503 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms