Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Smarcc1P97496 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC14.46□□□□□ -0.1
Smarcc1P97496 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Smarcc1P97496 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.46□□□□□ -0.1
Smarcc1P97496 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smarcc1P97496 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smarcc1P97496 Gm6831-202ENSMUST00000213025 1673 ntBASIC14.46□□□□□ -0.1
Smarcc1P97496 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Smarcc1P97496 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcc1P97496 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcc1P97496 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcc1P97496 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcc1P97496 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Smarcc1P97496 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcc1P97496 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcc1P97496 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcc1P97496 Gm14071-201ENSMUST00000117817 509 ntBASIC14.45□□□□□ -0.1
Smarcc1P97496 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcc1P97496 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC14.45□□□□□ -0.1
Smarcc1P97496 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC14.45□□□□□ -0.1
Smarcc1P97496 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcc1P97496 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcc1P97496 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC14.45□□□□□ -0.1
Smarcc1P97496 Gm24992-201ENSMUST00000157412 130 ntBASIC14.45□□□□□ -0.1
Smarcc1P97496 Gm9369-201ENSMUST00000196009 733 ntBASIC14.45□□□□□ -0.1
Smarcc1P97496 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcc1P97496 Gm9487-201ENSMUST00000216600 472 ntBASIC14.45□□□□□ -0.1
Smarcc1P97496 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC14.45□□□□□ -0.1
Smarcc1P97496 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcc1P97496 Gm8255-201ENSMUST00000218693 305 ntBASIC14.45□□□□□ -0.1
Smarcc1P97496 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcc1P97496 Arhgef33-207ENSMUST00000224966 490 ntBASIC14.45□□□□□ -0.1
Smarcc1P97496 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcc1P97496 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcc1P97496 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcc1P97496 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcc1P97496 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcc1P97496 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcc1P97496 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcc1P97496 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcc1P97496 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcc1P97496 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcc1P97496 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcc1P97496 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcc1P97496 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcc1P97496 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
Smarcc1P97496 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcc1P97496 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcc1P97496 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC14.44□□□□□ -0.1
Smarcc1P97496 Gm14165-201ENSMUST00000121456 952 ntBASIC14.44□□□□□ -0.1
Smarcc1P97496 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC14.44□□□□□ -0.1
Smarcc1P97496 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC14.44□□□□□ -0.1
Smarcc1P97496 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC14.44□□□□□ -0.1
Smarcc1P97496 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
Smarcc1P97496 Gm26368-201ENSMUST00000157826 118 ntBASIC14.44□□□□□ -0.1
Smarcc1P97496 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcc1P97496 Gm25998-201ENSMUST00000175397 53 ntBASIC14.44□□□□□ -0.1
Smarcc1P97496 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcc1P97496 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcc1P97496 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC14.44□□□□□ -0.1
Smarcc1P97496 Capsl-202ENSMUST00000226688 739 ntBASIC14.44□□□□□ -0.1
Smarcc1P97496 AC142266.1-201ENSMUST00000228107 415 ntBASIC14.44□□□□□ -0.1
Smarcc1P97496 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcc1P97496 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.44□□□□□ -0.1
Smarcc1P97496 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcc1P97496 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcc1P97496 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Smarcc1P97496 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Smarcc1P97496 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcc1P97496 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcc1P97496 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcc1P97496 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcc1P97496 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcc1P97496 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcc1P97496 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcc1P97496 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcc1P97496 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcc1P97496 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcc1P97496 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Smarcc1P97496 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcc1P97496 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcc1P97496 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC14.43□□□□□ -0.1
Smarcc1P97496 AC165351.1-201ENSMUST00000219078 2020 ntBASIC14.43□□□□□ -0.1
Smarcc1P97496 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Smarcc1P97496 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcc1P97496 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Smarcc1P97496 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Smarcc1P97496 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
Smarcc1P97496 Gm15196-201ENSMUST00000121406 482 ntBASIC14.43□□□□□ -0.1
Smarcc1P97496 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC14.43□□□□□ -0.1
Smarcc1P97496 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcc1P97496 Gm12906-201ENSMUST00000154610 441 ntBASIC14.43□□□□□ -0.1
Smarcc1P97496 Gm4982-201ENSMUST00000160440 1098 ntBASIC14.43□□□□□ -0.1
Smarcc1P97496 Gm44124-201ENSMUST00000204159 472 ntBASIC14.43□□□□□ -0.1
Smarcc1P97496 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC14.43□□□□□ -0.1
Smarcc1P97496 Gm18035-201ENSMUST00000211962 589 ntBASIC14.43□□□□□ -0.1
Smarcc1P97496 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Smarcc1P97496 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcc1P97496 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcc1P97496 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms