Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Npas1P97459 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Npas1P97459 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC9.69□□□□□ -0.86
Npas1P97459 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
Npas1P97459 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Npas1P97459 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.68□□□□□ -0.86
Npas1P97459 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Npas1P97459 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Npas1P97459 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC9.68□□□□□ -0.86
Npas1P97459 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Gm43579-201ENSMUST00000202387 1307 ntBASIC9.68□□□□□ -0.86
Npas1P97459 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Npas1P97459 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
Npas1P97459 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC9.68□□□□□ -0.86
Npas1P97459 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC9.68□□□□□ -0.86
Npas1P97459 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC9.68□□□□□ -0.86
Npas1P97459 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC9.68□□□□□ -0.86
Npas1P97459 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Gm44799-201ENSMUST00000207639 1202 ntBASIC9.68□□□□□ -0.86
Npas1P97459 Gm17931-201ENSMUST00000208132 634 ntBASIC9.68□□□□□ -0.86
Npas1P97459 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC9.68□□□□□ -0.86
Npas1P97459 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC9.68□□□□□ -0.86
Npas1P97459 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 n-R5s195-201ENSMUST00000082891 119 ntBASIC9.68□□□□□ -0.86
Npas1P97459 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Npas1P97459 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC9.68□□□□□ -0.86
Npas1P97459 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC9.68□□□□□ -0.86
Npas1P97459 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Gm9796-201ENSMUST00000062249 2250 ntBASIC9.68□□□□□ -0.86
Npas1P97459 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.68□□□□□ -0.86
Npas1P97459 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Npas1P97459 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Npas1P97459 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Npas1P97459 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC9.67□□□□□ -0.86
Npas1P97459 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Npas1P97459 AC153380.1-201ENSMUST00000214959 2364 ntBASIC9.67□□□□□ -0.86
Npas1P97459 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Npas1P97459 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Npas1P97459 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Npas1P97459 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC9.67□□□□□ -0.86
Npas1P97459 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Npas1P97459 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
Npas1P97459 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC9.67□□□□□ -0.86
Npas1P97459 Gm21115-201ENSMUST00000187565 2578 ntBASIC9.67□□□□□ -0.86
Npas1P97459 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Npas1P97459 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Npas1P97459 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Npas1P97459 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC9.67□□□□□ -0.86
Npas1P97459 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Npas1P97459 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC9.67□□□□□ -0.86
Npas1P97459 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC9.67□□□□□ -0.86
Npas1P97459 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Npas1P97459 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Npas1P97459 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC9.67□□□□□ -0.86
Npas1P97459 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC9.67□□□□□ -0.86
Npas1P97459 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC9.67□□□□□ -0.86
Npas1P97459 H2-Pa-201ENSMUST00000182803 626 ntBASIC9.67□□□□□ -0.86
Npas1P97459 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC9.67□□□□□ -0.86
Npas1P97459 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC9.67□□□□□ -0.86
Npas1P97459 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.67□□□□□ -0.86
Npas1P97459 Gm4935-201ENSMUST00000221316 1198 ntBASIC9.67□□□□□ -0.86
Npas1P97459 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC9.67□□□□□ -0.86
Npas1P97459 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Npas1P97459 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Npas1P97459 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Npas1P97459 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Npas1P97459 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC9.67□□□□□ -0.86
Npas1P97459 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Npas1P97459 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Npas1P97459 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Npas1P97459 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Npas1P97459 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Npas1P97459 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Npas1P97459 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Npas1P97459 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.67□□□□□ -0.86
Npas1P97459 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Npas1P97459 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms